FEATURES             Location/Qualifiers
     gene            complement(536..1768)
                     /locus_tag="Alpa_01"
     CDS             complement(536..1768)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MDPTVLGAIISAGAGLGSSVASGIASGKMNKKSIKYNKWALQEQQRFQSEQAQLGRDWSEEMMSKANQWNLEQWNRENEYNLPVNRKARLLAAQINPALAMQGGSSVGQAASSPSSASAPSPASPSGASALPLNLQRPDYGTGFAQLSSAVNSYFENKQRDVITEGYGLDNALKATYGDRAYRLSLGKTEAEIDNIRASTAKSYADSALVNLQAKEKEILNKYLDAGQQLSLFLKIGELATMKTQRELLSAQTRKAIAEEIEVSARARGLKISNYIAEQTAERLIIATNEENRYRGIHARSSAAWTPVRDFYKTSQMSADLKASEVANIMAEFERYTKDTPGNRWIQKNIVPVSSALGPLLDAAAMFTVAGKLGKSVNIFKPKYGKTSKYSWKEYKYGENPKTPKYSWKE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 21 and 22 "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1771..2199)
                     /locus_tag="Alpa_02"
     CDS             complement(1771..2199)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MEKRDIINVLSNSEFTTVRPIDELRFVEELDGSIRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQVNPSSPYKDAKFTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVKAKLEEMKASESESSESIETVESKSE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:INSD:WP_004291033.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2217..4007)
                     /locus_tag="Alpa_03"
     CDS             complement(2217..4007)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MGSRLFSYGDVKGRPSRAGFDLSKKFCFTAKAGELLPVYWKMLLPGTKVNLKDMHFTRTMPVNTAAYTRIKEYFDWYFVPLRLINKNLNPALVNMLDQSNIANSLIQNKVVSDEIPCFDYDTLTSCLKAFNTQHPSYLDIAGFERVPKTLKLLRYLRYGNFLYDTGFSTLPSKNMNYSSVKDFNLYAKWNLNVNVLPLAAYQKIYCDYFRFEQWEKAQPYTYNFDYYSGGNILTEYKGDPSDLFLKDNLFSLRYANYPKDLFMGILPSSQLGSVATINISHSSSAGVHLTNQEGYLTGTVASDGTTITVKNTRSLTPGISPVLRTNFADLNANFDILSFRIANAIQRMREIQQCAGQGYKEQLEARWNVKLSTALSDHCTYIGGNSSQINISEVLNNSLDTEQSQADIKGKGVGSGSGSESFETQEHGILMCIYHAVPVLDYQLTGPDLQLLNTYATDLPQPELDNLGLEALPYFTFVNDAVATQPNNVTVKSIIGYVPRYIAYKTDIDCVDGAFLTSLTSWVTPLTIDEIVTKISLGSGTGPFTPNYGLFKVSPYVLDSIFVSQCDSTVDTDQFLVESFFDVKLVQNLDYNGMPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4041..4259)
                     /locus_tag="Alpa_04"
     CDS             complement(4041..4259)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="LDDLANPDFIGDSMVLMMRDRFRVSSVSQCDEYCRRLEKYLNSLSIYRYKVTQYPRDKSHEFISEQVLLPFD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4279..5748)
                     /locus_tag="Alpa_05"
     CDS             complement(4279..5748)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="VPKCQIFKVHPDDPDSTLYELVVKPRRRGDYKMVQKVYSKKYKKVIKKEVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFISFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVDFLIAPVTEDTPSSNGVSALEHHPPFESLVKSHPILSLAQAKAKTDCDNRVKHREINERNLKYV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_004291031.1"
                     /db_xref="eggNOG:bacteNOG07343"
                     /db_xref="eggNOG:bctoNOG24068"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 aatttactag aatgatgttg caaaaaacat tgaagatcag aagaattaac aatataaaat 
       61 ttcttctcct taccaaaatc aacgatagca agtaattttt catccattaa ctcaaaatct 
      121 tttgtttcca tagtaccaac ttttaaaatt aatatttcat tgcaagtata gtaaaaaaaa 
      181 agatatgtta caacggtgtc acttgtgggt aattatgaca agagaaaacc tttgcagggt 
      241 gataacctgc aaatccttcg gacacaagta tttagatttc atagttaaag taacttaaat 
      301 aatttaaacg ctgccttcca gttccctgca actcccaaag ggagattgga gggaaatagg 
      361 aaggtcaggc agctaaatgg tgactcgagt gctcgccgca gggcaggagg atgaggaaat 
      421 ccgagacctg gaattctata tttgaatgaa caggacgtaa aaagaaaaga gttacattac 
      481 tgcaactctt tcggaatatc caatacatca attccaacaa cagaattaaa atatgttact 
      541 ctttccaaga atacttcgga gttttcggat tttcaccgta cttatactct ttccaagaat 
      601 acttcgaagt tttaccgtac ttaggcttaa aaatattaac agacttacca agcttaccag 
      661 cgacagtaaa catagcagca gcatcaagca aaggaccaag ggcagaagac acgggaacga 
      721 tattcttttg aatccaacga ttaccaggag tatccttcgt gtaacgctcg aattcagcca 
      781 tgatattcgc aacctcagag gctttaagat cggcagacat ttgactagtc ttataaaagt 
      841 ctcgaacagg agtccaagca gcagacgaac gagcgtgaat gccacggtaa cgattttcct 
      901 cgttagtagc aataatcaaa cgctcagcag tctgttcagc aatataatta gaaatcttaa 
      961 gaccacgagc acgagcagaa acctcaattt cctcagcaat agccttacga gtctgagcag 
     1021 acaacaattc acgctgagtt ttcatcgtag caagttcacc aatcttgaga aataaagaaa 
     1081 gttgctggcc agcatccaga tatttattca aaatctcttt ctctttagcc tgcaaattaa 
     1141 ccaaagcaga atcagcataa gacttagcag tagaagcacg aatattatca atttcagcct 
     1201 cagtcttgcc aaggcttaac cgataagcac gatcaccata cgtagccttt aaagcattat 
     1261 caaggccata accttcagta ataacatcac gctgtttatt ctcaaaataa gaattcacag 
     1321 cagacgaaag ttgagcaaaa ccagtaccat aatctggacg ttgtaagttc aaaggaagag 
     1381 ctgacgcacc agacggggac gcaggagaag gagcagaagc cgaagacgga gaagaggcag 
     1441 cctgtccaac agaagagcca ccttgcatag caagagccgg gttgatctgg gctgctagaa 
     1501 gacgtgcttt tcgattcacg ggaagattgt attcattctc acgattccat tgctccaaat 
     1561 tccactgatt cgccttagac atcatctctt cagaccaatc acgaccaagt tgagcttgtt 
     1621 cagattgaaa tctttgctgt tcctgtaaag cccatttatt atacttgata ctctttttat 
     1681 tcatcttgcc agaagcaatg ccagaagcaa ctgaacttcc aagaccggct ccagcagaga 
     1741 taatagcacc taagactgta ggatccatga ttattcagat ttagattcaa cagtttcaat 
     1801 agattcagaa gattcggatt cagaagcctt catttcttct aatttagcct taacttcatc 
     1861 agaaatttgt tcctgcttat caagcatatc acgaacccat tcacgaactt cagaaggaga 
     1921 ttgaacataa cgagatttaa tctcggtcat caattgctcg tcggtaaatt tagcatcctt 
     1981 ataaggagaa gaaggattaa cctgtaattg acgaatgaaa ttacgataat tatcctcacc 
     2041 aatatcattt ataatacgct gctcatttaa aagcaacgtg gcatcagaaa caaaacgaat 
     2101 agaaccgtca agttcttcaa caaaacgcaa ttcatcaata ggacgaacag tagtgaattc 
     2161 agagttcgaa agaacattta taatatctct tttttccata acaaacaaat tttagattaa 
     2221 tacggcatac cattataatc aagattctga acaagcttca catcaaagaa agattcaacg 
     2281 aggaactgat ccgtatcaac agtactatca cactgagaaa caaaaataga atctaaaaca 
     2341 taaggtgaaa ctttaaaaag accataatta ggagtaaaag gaccagtacc agaaccaaga 
     2401 gaaatcttgg taacaatctc atcaatagtc aaaggagtaa cccaagacgt taaagaagtc 
     2461 aagaaagcac catctacaca atcaatatcc gtcttataag ctatataacg aggaacataa 
     2521 cctataatag atttcacagt aacattatta ggctgagtag caacagcatc attcacaaaa 
     2581 gtaaaatacg gaagagcttc caatccaaga ttatctaact cgggttgagg aaggtcagta 
     2641 gcataagtgt tcaaaagctg aagatcagga ccagttaatt gataatccaa aacaggaacc 
     2701 gcatgataaa tgcacatcaa aataccatgc tcttgagttt caaaagattc agaaccagaa 
     2761 ccagaaccaa cacctttacc tttaatatcg gcttgcgatt gctcggtatc caaactatta 
     2821 tttaaaacct cggaaatatt aatctgggaa gaattaccac caatataggt acagtgatca 
     2881 gacaaagccg tagaaagctt tacattccaa cgagcctcga gctgctcttt atatccttgg 
     2941 cctgcacatt gttggatttc acgcatgcgc tgaatagcat tagcaatgcg gaaagaaaga 
     3001 atatcaaaat tagcattcaa atctgcaaaa ttagtcctaa gtacaggact aattcccgga 
     3061 gtaagagacc gagtattttt aacagtaata gtagtgccgt cactagcaac ggttccagtt 
     3121 aaataaccct cctggttagt caaatgaaca ccagcactag aagaatgact aatattaata 
     3181 gtagcaaccg atcctaattg agaagacggt aaaataccca taaaaagatc tttcgggtaa 
     3241 ttagcataac gaagagaaaa caaattatct ttcaaaaaca aatcagaagg atcgccttta 
     3301 tattcagtca aaatattacc accagaataa taatcaaaat tatacgtata tggttgagcc 
     3361 ttctcccatt gctcaaaacg gaaatagtca caataaattt tctggtaagc agctaaagga 
     3421 agaacattca cattcaaatt ccacttggca taaagattaa aatctttaac agaagaataa 
     3481 ttcatattct tgctaggaag agtagaaaaa ccagtatcat ataaaaaatt accgtaacga 
     3541 agataacgta ataacttcaa agtcttagga acacgctcaa agccagcgat atcaagatac 
     3601 gacggatgct gagtattaaa agctttcaaa caagaagtca aagtatcata atcaaaacaa 
     3661 ggaatctcat cagaaacaac tttattttga atcaaagaat tagcaatgtt agattgatcc 
     3721 aacatattta ccaaagcagg attcaaattc ttattgatca gacgaagagg aacgaaatac 
     3781 cagtcaaaat actccttgat acgagtgtaa gcagcggtat taaccggcat ggtacgagta 
     3841 aagtgcatat ccttcaaatt tactttcgta ccaggaagca acattttcca ataaacaggc 
     3901 aacaattcac ctgccttggc agtaaaacaa aactttttag aaaggtcaaa accggcacga 
     3961 gacggcctac ctttcacatc tccataagaa aaaagtcgtg aacccataaa ttaaaattta 
     4021 agttaaaatt taagtttaaa ctaatcaaaa ggtaacaaca cctgctcaga aataaactcg 
     4081 tgagatttat ctcgaggata ctgcgttacc ttatatctat aaatacttag agagtttaaa 
     4141 tatttttcca aacgacgaca atactcgtca cattgggaaa cagaagagac acggaaacga 
     4201 tcacgcatca tcaaaaccat gctatctcca ataaaatcgg gattcgcaag atcatccaat 
     4261 cgatatatat aaatagttct acacatattt caaatttcgt tcattaattt cacgatgctt 
     4321 aacacgattg tcacaatccg tcttggcctt agcttgggct aaagacaaaa taggatgaga 
     4381 cttgacaaga gattcaaaag gcggatgatg ttctaaagca gagacaccat tcgaagaagg 
     4441 agtatcttca gtaaccgggg caatcaaaaa atcaactaac tcttcatcaa gatcaactaa 
     4501 acccacgagg tcagtgtact gagaacgtaa catatgataa gaaagccgag aataatacca 
     4561 cttagaaaga tcaaccgtcc tataaatgta ttcataagac gacgaaggag taatatccca 
     4621 gaacgaaata aatttaccaa cacacgaaaa aagacgatat aaccgcatac aatcactatc 
     4681 gaataaatca tccgagcgaa catcggtcgt tggggattcg agtcgagcat aataataaca 
     4741 agtataaagt tgattctcaa tacttaaaaa atcttccaca gaacgagaag acatagaata 
     4801 gatagatcga agatgaagcc tacaaacatc catcaaggtt gcatcgggat tgtctcttcg 
     4861 gactgtttga aaagatctgg ataacgtcgt agatacgctt cgtacaagcc aatataattc 
     4921 atggctagac aatcgaccat tgcacgcata tcggagaaag caggaatcga caaccgacct 
     4981 gggagggcgg attgcgagaa gttttccatt aatgaggcta gggactccat taaggaatgg 
     5041 agagagcggg gtctcttcga tcggtcggga aatactatct ctaacggctt ccttggcgtc 
     5101 aaaaaagcat gatgttgcaa atccgttcga gaaacgagaa tacggtttaa ctctatcatc 
     5161 ctgtttaagg tgatagggaa ggcgactaaa tgagttaaca tagcccgcaa cgtacgattc 
     5221 agcgtcgcct ctcgaggcag accaatcaca acgaccaaat ttccagctcg aattaacaat 
     5281 tcggccaata ttcttggcga ccctgtccga gtccgtgaat aataagatat ggaaatgcgg 
     5341 acggaagtgt acgggtccgt attctgatac aaggtagata tgtacttttt catattttcc 
     5401 agcaaattta aatatatgct tacgcaaacg tttaacaaat aattggccgt ccttacgaga 
     5461 aatataaccg taataatctt gtaaatgagg atactttccg ttaacattca aagtggcctg 
     5521 ctcacgaaaa tcacggatat attcttcaga agcattaaaa taataagaaa aatcatcagt 
     5581 ataagaaaga ggagcatcta cttccttttt aatgaccttt ttatatttct tagaatacac 
     5641 cttttgaacc atcttataat ctcctcgacg tctaggtttg acaacaagct cgtaaagagt 
     5701 tgaatcagga tcatcaggat gaaccttaaa aatttgacac ttcggcacat atttttg 
//
