FEATURES             Location/Qualifiers
     gene            complement(587..1642)
                     /locus_tag="Alpa_01"
     CDS             complement(587..1642)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MLGGIIAAATSAIGSQIKGIEARDAEDRAFAKQKELMDKQYELNNKMAEQNQQRAKYMWDYTNFENQKQHLLNANLSPGLFYGGTGAGGQTSGGQGSGVGLGSETGVGFGIQEKALGLQLAGMASQVALNQSQANKNNAEANKIKGADTKLAESQTSLNNAMENLTNTKENTEAANYNLALQEQSKVFEEARTMANQNDIIEATKQTQIDTVIQNYYLNSLTAFEKIAGIELKGKEAAYISKQIEWYSFEAITKRMSAEAMQKMAESAAERVKNDFEIAGKKIDQEQEKILQTWIFESVKSLCNVAQTTGDIISLFKKPIQKVGEKVFEEMFDAKGKSKGFKEVIKDFKMK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 14 and 15 "
                     /inference="similar to AA sequence:MV_prot:putative.gpH"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1791..2099)
                     /locus_tag="Alpa_02"
     CDS             complement(1791..2099)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MKTAKLIKCTGRMHSVETFEGETIEEKVNRIVNNGEPIKDGAPIIYTEKKDGVLPEYDIRTDRWDIAIEAMDKVNMDRMAKRENKPDVTEVPDKKDGSPSEN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2103..4058)
                     /locus_tag="Alpa_03"
     CDS             complement(2103..4058)
                     /product="capsid family protein [Parabacteroides distasonis str. 3999B T(B) 4]"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MSIQKNIGKNTIGDNKKMEVDLKTYNRSTHNLSTVIRNTQSAGTLVPTCTIVMQKDDTFEINIESSVLTHPTTGPLYGSFKLENHVFFIPFRLYNSWLHNNRLGIGLDMSQIKLPQLHVTLNKLHDQPGEDEKQWSQINPSCLLSYLGIKGYGGMNNNATAPTATKNAVKVLGYWDIFKNFYANKQEENYYMIGSNDPLSITINNTQITDPNNIPQNQGTVNAKSIIEIDDVLSIYNNSNVTLWVTQQIGHSPVKMTADEIGTTSTDNQKFIIQNLKIPTGNTWWIRTIQSTQQQALVPFPLDEFDTLRDEILAKKGNQTFYLGDGKSSTQIANVFNERGDNQKLKTTRPQYGLLLKTYNSDLYQNWINTEWIDGANGINEITAVDVSDGTLSMDALNLQQKVYNMLNRIAVSGGSYRDWLETVYASGQYIERCETPTFEGGTSQEIVFQEVVSNSATENEPLGTLAGRGINAGKQKGGKIKIRATEPGYMMCITSITPRIDYSQGNDFDSDWISLDDMHKPALDGIGYQDSVNSGRAWWDDVYINNTGKAAKRTAGKTVAWIDYMTNVNRTYGNFAAGMSEAFMVLNRNYEMKYEAGTNPKISDLTTYIDPVKYNYIFADTSIDAMNFWVQIKFDITARRLMSAKQIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:KDS63784.1"
                     /inference="similar to AA sequence:INSD:KDS75238.1"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4060..4308)
                     /locus_tag="Alpa_04"
     CDS             complement(4060..4308)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MANLKEAFKIRLLPESEEYVITIGSHLATEEKFKSEKAAQMQINKTNWDLVSALVYALKEADEWAEKNPELINQTKEAKEGK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4348..4497)
                     /locus_tag="Alpa_05"
     CDS             complement(4348..4497)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MDRNHSSYQYGNHCYNYDLMCTIVYNEPIRKQKQSKFNAKNRTNNNVKR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4521..4697)
                     /locus_tag="Alpa_06"
     CDS             complement(4521..4697)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="VWYQTPQKSVKTSYELCEDVITKKYIIRKLERRLICEKIYDSEEEELKIWRQKQLKLW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4744..4956)
                     /locus_tag="Alpa_07"
     CDS             complement(4744..4956)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MAATKFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIVPKDERIIAVVESWKLYPNENEKTEKKQKI"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5016..5225)
                     /locus_tag="Alpa_08"
     CDS             complement(5016..5225)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MAETKFTAIYVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESWKLYPNENEKTEKGQKN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5245..5424)
                     /locus_tag="Alpa_09"
     CDS             complement(5245..5424)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_09"
                     /translation="MKTLKQLLENYVVIEIRFKEYKRILIILKGKDSKKQKSKWIDKNYFKRNYPNTSKFFNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 atatcccatt cctatacctt ttgagcataa tactttcccg ataaatcctg gatgatctaa 
       61 atcttctttt gtcatgtatt ttgtgatata gttaattgtt tgttcgttca cgaagtaacc 
      121 tgtaaaggtt attccgtaat tccatttctc ttctatcaat ttgtctatac ctattcccca 
      181 tactatcccg tgcaaatgta atctttctgt tttctcgtgc cctagctctg taataaacca 
      241 gtgctttata gatttcccag ttttttttcg gatacgttct aacataaggc gaatagcttt 
      301 tgtcgctatt gtgtttgggt cttctgattt gcatatattt tttagtattt cgtaattttc 
      361 atctgatatt gttaatgtca tgaagtaagc gtttggagtt tgtcttaatt cttcactcat 
      421 tcttactagc cattgtcttt gtttttgttg tctacattcc atgcatttgc cacatgctgc 
      481 ggttacgtag agtaatcttt catcaggaca gaccggaggt ctgccgttat tttttttgtt 
      541 tggtatatac ctccggtttt ttatgagttt aggatataga cacatattac ttcattttaa 
      601 aatctttgat tacttcttta aagccttttg atttgccttt tgcatcaaac atttcttcaa 
      661 atactttttc tcctactttt tgtataggtt ttttaaacag gcttattatg tctcctgtgg 
      721 tttgtgctac attacataga gattttacgc tttcgaatat ccaggtttgt agtatttttt 
      781 cttgctcttg gtctattttt ttgcctgcta tttcaaagtc gttttttact ctttctgccg 
      841 cactttctgc cattttttgc atagcttctg cgctcattct ttttgttatt gcctcgaatg 
      901 aataccattc gatttgtttt gatatatatg ccgcctcttt ccctttgagt tctatacctg 
      961 ctattttttc aaatgctgtt aaactgttta ggtagtagtt ttgtattacc gtgtctattt 
     1021 gcgtttgttt tgtagcttct ataatatcgt tttgatttgc cattgttcta gcttcctcga 
     1081 atactttgct ttgttcttgt aaagctaggt tatagttggc tgcctctgtg ttttctttcg 
     1141 tgtttgttag attttccatt gcattattaa gactcgtttg agattctgct agctttgtgt 
     1201 ccgctccttt gattttgtta gcttctgcgt tgtttttatt tgcttggctt tgatttaatg 
     1261 ctacttgtga tgccattccc gctagttgta gccctaatgc tttttcttgt attccaaatc 
     1321 ctacacctgt ttcgcttccc aatcctactc cgcttccttg tcctccgctt gtttgtccac 
     1381 ctgcacctgt tcctccgtag aataagcctg ggcttaaatt tgcgtttagc aagtgttgtt 
     1441 tttggttttc gaagtttgtg tagtcccaca tgtatttggc acgttgctga ttttgctctg 
     1501 ccattttgtt attaagctca tattgtttat ccatgagttc tttttgtttt gcaaaggctc 
     1561 tatcttccgc atctctggct tctattcctt tgatttggct gcctattgcc gatgttgctg 
     1621 ctgctattat tcctcctaac ataattcaat aatttaattt tacaattttc gcgctttttt 
     1681 aaaagcgtta tactatatac tcgatataat atactgtatg cgtactgtca tacattactt 
     1741 tttacaaaag tcaatgtatc gtttcgcata cagtggctcg gctttgccga ttagttttca 
     1801 gatggtgatc cgtctttttt atctggtact tctgttacat ctggcttgtt ttcacgtttt 
     1861 gccattctgt ccatatttac tttgtccata gcttcaatag ctatatccca tctgtcagta 
     1921 cgtatgtcat attctggtag aacaccgtct tttttttctg tgtagatgat tggtgctccg 
     1981 tcttttattg gttctccgtt gttcacaatt cgatttactt tctcttcgat tgtttcgcct 
     2041 tcgaatgttt ctaccgaatg cattcgtccg gtacatttta ttaattttgc tgttttcata 
     2101 ttttacaagt ttggaatttg ttttgcactc attaatcttc tcgctgtaat gtcaaattta 
     2161 atttgtaccc agaagttcat agcgtctata ctggtatctg caaaaatgta gttatatttt 
     2221 acagggtcta tgtaggttgt caggtctgat attttcggat ttgttcctgc ttcatacttc 
     2281 atttcataat ttctgttaag taccataaac gcctcactca ttcctgccgc aaagtttccg 
     2341 tatgtcctgt ttacatttgt catatagtct atccaagcaa cggttttccc tgcggtgcgt 
     2401 tttgcggctt tgcctgtgtt gtttatgtat acgtcgtccc accatgcacg tccgctgttt 
     2461 acgctgtctt ggtatccgat tccgtctaat gcaggtttat gcatgtcgtc tagtgatatc 
     2521 cagtcgctgt cgaagtcatt tccttgtgag tagtcgattc gtggtgtaat gcttgtgata 
     2581 cacatcatat accctggttc tgttgctctt attttgattt ttcctccttt ttgtttgcct 
     2641 gcgtttattc ctcgccctgc aagtgttcct aaaggctcgt tttctgtagc gctgttactc 
     2701 accacttctt ggaatacgat ttcttggctg gtacctcctt cgaatgttgg tgtttcacat 
     2761 ctttcgatgt attgtccgct tgcgtatact gtttccaacc aatctctgta agaccctcca 
     2821 cttactgcaa ttctgtttaa catattgtaa actttttgtt gcagatttag cgcatccatt 
     2881 gacagagtac cgtcgcttac gtctacggct gttatttcgt taattccgtt tgcgccgtct 
     2941 atccattccg tgttaatcca gttctggtat aagtcgctgt tgtatgtttt taacagtagt 
     3001 ccgtattgcg gtctggttgt ttttagtttt tggttatcac ctctttcatt gaatacgttt 
     3061 gctatttgtg ttgagctttt tccatctccc aggtagaaag tttgatttcc tttttttgct 
     3121 agaatttcat ctcttagtgt atcaaattca tctagaggaa aaggtactag tgcctgttgt 
     3181 tgtgttgatt gtattgtacg tatccaccaa gtatttccgg ttggtatttt taagttttgt 
     3241 attataaatt tttgattgtc tgttgaagtt gtacctattt cgtctgcagt cattttcact 
     3301 ggactatgtc ctatttgctg tgttacccat aacgttacgt ttgaattgtt gtagatactt 
     3361 aatacatcat ctatttcgat gattgacttc gcatttacgg taccctggtt ttgaggtatg 
     3421 ttgttagggt ctgttatttg agtgttgttg atcgtgattg atagaggatc attactaccg 
     3481 atcatgtagt aattttcttc ctgtttgtta gcatagaagt ttttgaatat atcccaatac 
     3541 cctaacacct ttactgcgtt ttttgttgct gttggtgcgg ttgcgttgtt attcattcca 
     3601 ccgtatcctt tgattcctaa gtatgatagt aggcaactcg ggtttatttg tgaccattgt 
     3661 ttctcgtctt ctcccggctg gtcgtgtagt ttatttaaag ttacgtgtag ttgtggtaac 
     3721 tttatttgtg acatgtctag tccgattcct aacctgttgt tatgtaacca gctattgtat 
     3781 aatctgaacg gtataaagaa tacatgattt tctagtttga agcttccgta taatggtccc 
     3841 gttgttggat gtgttagtac gctactttct atattgattt cgaatgtatc atctttttgc 
     3901 atcactattg tacatgttgg tacaagtgtt ccagcacttt gtgtatttct gattactgtt 
     3961 gataggttgt gtgtagatct gttataggtt ttcaaatcta cttccatttt tttattatca 
     4021 cctattgtat ttttaccgat atttttttgt attgacatat tacttgccct ccttggcttc 
     4081 tttagtttgg ttaattagtt ctggattttt ttcagcccat tcatccgcct cttttaaggc 
     4141 atatactagt gcgcttacta gatcccaatt ggttttgtta atttgcattt gagctgcttt 
     4201 ttcgcttttg aatttttctt ctgttgccag gtgactaccg attgttataa catattcttc 
     4261 tgattctggt aacagtctga ttttgaatgc ttcttttaga ttcgccatga ttaatagttt 
     4321 ttaggattaa tattaatgtg agtactgtca acgcttgacg ttgttgtttg ttcggttttt 
     4381 tgcgttgaat tttgattgtt tttgcttacg gataggctca ttgtacacga ttgtacacat 
     4441 aaggtcgtaa ttatagcaat gattgccgta ctgatagctc gaatgatttc tatccattgt 
     4501 tgccctgtga ttttcataat ttaccatagt tttaattgtt tttgtctcca aatttttaac 
     4561 tcttcttctt cgctgtcata aattttttca catattaacc tcctttctaa ttttcggatg 
     4621 atgtattttt ttgtaattac atcttcacat agttcgtaac ttgtttttac tgatttttgt 
     4681 ggtgtttgat accacacgta gtgttttacc tcttgtaagg tattaaatat aaagccatct 
     4741 acttcatatt ttttgttttt tttcggtttt ttcattttcg ttaggatata atttccatga 
     4801 ttctaccact gctattatac gttcgtcttt cggtacgatt gcttttgcga ttgttaccgc 
     4861 tattttgtat gtacattctg ctggtaattc ttttatcgac atatgaaaac tagggttgtt 
     4921 tcctgttgtg attactgaaa attttgttgc tgccatagtt aaaatgattt tttagtttat 
     4981 acatattatt gaatataccc aatattcgtt gtttattaat ttttttgtcc tttttcggtt 
     5041 ttttcatttt cgttaggata taatttccat gattctacta cacatactag tttggtttct 
     5101 tccggatcat ttagtatttt agcgaatttt tttgctattt tatacgtatt catacctgga 
     5161 atttctcttt cgattatttt tccttcgtta ttaacgtaga ttgctgtaaa ttttgtttct 
     5221 gccataattt ttggttttaa ttatttataa attgaagaat tttgatgtat taggataatt 
     5281 tcttttgaaa taatttttgt ctatccattt tgacttttgt tttttgctat ctttgccttt 
     5341 tagtattatg agtattcttt tgtattcttt gaatctaatc tcaattacta cataattttc 
     5401 taatagttgt tttaatgttt tcatatttac ctccttgttt tttattacac tacaaatata 
     5461 cgtgtttttt ttgattctgc aaattttctt gttatcttta acatttattt aacacttttg 
     5521 cttggcgagg ctgcgtgccg tttgaacgct gatggtgcaa tagagggcgc atagccctcc 
     5581 ttaacgtcta gtaccttgat atcgctgaag gcgcacacta cgcccgttag ggtgagtgca 
     5641 cgccatttct tatcctggtc ttaaggcagc tgccttttgg tcttttgctg tcttttcctc 
     5701 ccgctataca ctttttaaaa tggacatgat tcgatttgag tgtaggtttt 
//
