FEATURES             Location/Qualifiers
     gene            662..946
                     /locus_tag="Alpa_01"
     CDS             662..946
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MKQNIYFRNGEDLKKKACELIDKCIDFKVEGDCIIIEKPNNVRITCKVENGIKMKEIYIDGFLMQDVVEKVYRTVNIEELFGEPCRIMKIEILE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            943..1197
                     /locus_tag="Alpa_02"
     CDS             943..1197
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MKEYVQYYSEISTKPTADYRMFKRYHAFKMKNEQEITGWKIDMNGCVLKEYLIRKKGGQIRLRLTKDNQEEQRKVEQKKQLNLW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1399..1629
                     /locus_tag="Alpa_03"
     CDS             1399..1629
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MNFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLEGEKKQQEENIKQTEE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1633..3540
                     /locus_tag="Alpa_04"
     CDS             1633..3540
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MADMITKNIGKNTIGDNNKMTVSMRKYQRSTHDLSYAWRNTQTVGTLVPFMCEVGLPGDTWELHTEASVLTHPTVGPLFGSFKLQGEYYVCPIRLYNGVLHNNKIGIGLKMTQAKLPKLNIQLKSTDNPTKENQNSQINPSCLLSYLGLKGYGKTESTSEITVLKNITAGLAYWDIFKNYHANKQEKNAYYIGTNTNITKIENTTSRWEATNPNNINREVNYNDNILITYTTNFKIESTTVKIKLQEKEVTKKLSDVINISSKNEGVVKGTWNMPTAVWINISYKEINLIPFPLENLDLMRDNILKDTGANSEYQIRSTTISPYGDLAKRSASGKLSTTSPMFGLALKTYQSDIFNNWINTEWLDGEGGINEITAIDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVYTNDYIERSETPVYEGGFSSEIIFQEVISNSATENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKVIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /inference="similar to AA sequence:INSD:KDS63784.1"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3557..3862
                     /locus_tag="Alpa_05"
     CDS             3557..3862
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MKTARVINTYNLKSVETYEGETIETKVARIVQEKTPITDGAPIIYTDREQGILPAYNVRTDRWDIAENAMDKINAAKMAKRDGNFGENVPDKIEGGTPSDN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4035..5138
                     /locus_tag="Alpa_06"
     CDS             4035..5138
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MSFWSKIGDAVKSIGKGIVNMIPGFAISTASNAVGGAMSAKDAKRQHQYDLEKMAVQHGYNIESQKLGQQFNKEMWDYTNYENQKKHLEAAGLNPALLYGMGGGGGATAAGAQGLGAGIASGHEMGIKQQGRGMGLQTAAIASQIDLNNSQAEKNRAEAKKTAGVDTNLQNANIEYVIAQTSNEKVKKGLIYANTRLLDAQEELQRTSVDYTKQKTDEVRWNIKLIEKEVDRLAKEINGLDLDNEYKKETLKNRITQTSLAIQQAIADIALKGSQGRLNDAEAKAIPEKILQMWAEIRTKQESVEVSKGQMENYAQDIANRLHLGEKGLDIQEQKLIIDCITGLLNIAVQGGLTPMGKVGSIAKGGK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 catcgacgat tacgactcat ataaaaatct actcgaatat caccgtaatc gcgcctcaag 
       61 actgtatcac gacaatccgc aaaattggga agaagcaaaa tatttaagaa gactagaacg 
      121 ccaaaggaat actagaaaaa agaccatgcg ggaaaaagcc tctgcagcac gtgttcgata 
      181 ttactcctga ctgcagggaa acctcttcgg tttccgcacc ttcccgctag gtgtatagcg 
      241 ggacacaact cttcctttag tcaaagatgc agctaccttc cgaacagcgg gttttgatgg 
      301 aagtgcaccc gccagacaag ctggcgtggt gtgcgccttc ggcgatacta aggtgctagt 
      361 cgctaaggga gctttgccaa gctcctattg cctaaggcgc gttcaaacgc cacgcaggct 
      421 gaagatacaa ccgactaacg gccgactgat ggcacagcaa atcaagcaaa tcaaaagaaa 
      481 aaggaaaaag ctgtgttaaa gaacgcaaac ggttcttaat cgggtatcaa atttgttgaa 
      541 tagaatatca attttgttga attatctact tttctttata aaatatgtga atatatttgg 
      601 ctgttacaaa aaaaccagca acatttgcag catcaaaata acaaatcaaa aacataaaat 
      661 tatgaaacag aacatttact ttagaaacgg agaagattta aaaaagaagg cttgcgaact 
      721 gatagacaaa tgcatagact tcaaagtaga aggagactgt attataatcg aaaaaccaaa 
      781 caatgtaaga ataacatgta aggtagaaaa cggaataaag atgaaagaga tctatataga 
      841 cggcttcctc atgcaagatg tagtagaaaa agtatacagg accgtcaata tagaagaatt 
      901 gttcggagaa ccttgtagga taatgaaaat agagatccta gaatgaaaga atacgtacaa 
      961 tattacagtg aaataagtac aaaaccaaca gccgattacc gaatgtttaa acgttatcat 
     1021 gcattcaaaa tgaaaaacga acaggagata accggctgga aaatagatat gaacggatgt 
     1081 gtcttgaaag aatacttaat ccgaaagaaa ggaggacaaa tcagattaag gcttacaaaa 
     1141 gacaatcaag aagaacaaag aaaagtagaa caaaagaaac agttaaattt atggtaaaac 
     1201 caactattaa acaatggata gacattatta aactaatttc tacattcatc atcggcgtac 
     1261 ttacaacact aacggtacaa agctgtacta tgagtatgtc gatattcaaa aacaataacg 
     1321 gaggtaatca acaaacagag cagagtacca aagtagacag tacagcaatc aatgttaaac 
     1381 caataaaatg aaccaattat gaatttcaac gaagtattca aagtaagaac agtaaaaaag 
     1441 aacgaagaag acacttatgt aattaccata ggtaatagac ttgcaagtga agaagaattt 
     1501 aaaacagccc aaaaagcaca aatgaaaatc aacaaaacag attggaattt agttgcaagc 
     1561 ctattcgcag caatgctcga aggagaaaaa aaacaacaag aagaaaatat taaacaaacg 
     1621 gaggaataag ccatggctga tatgattaca aaaaacattg ggaaaaacac cattggagat 
     1681 aacaacaaaa tgactgtatc aatgcgtaaa taccaaagat caacacacga tttaagttac 
     1741 gcatggagaa atacacaaac ggtaggaaca ctcgtaccat ttatgtgtga agtgggatta 
     1801 ccaggtgata catgggaatt acacacagaa gcaagtgtat taacacatcc aacagtagga 
     1861 ccattattcg gatcgttcaa actacaagga gaatattatg tatgtccaat cagattatac 
     1921 aacggagtat tacataataa caagataggg atcgggctta aaatgacaca ggcgaaacta 
     1981 ccaaaactaa atatacaatt aaaaagtaca gataatccaa caaaagaaaa tcaaaacagt 
     2041 caaataaatc caagttgctt actatcatat ctaggattaa aaggatacgg gaaaacagaa 
     2101 agtacatcag aaattacagt attaaaaaac ataacggccg gacttgcata ctgggatata 
     2161 ttcaaaaact accatgcaaa caaacaagaa aaaaacgcat attacatagg aacaaataca 
     2221 aacattacaa aaatagagaa cacaacctcg cgatgggaag caacaaaccc taacaacatt 
     2281 aatcgagaag taaattataa tgacaatatc ctaataacat atacaaccaa ttttaaaata 
     2341 gaatccacta ctgtaaaaat aaaattacaa gagaaagaag taacaaaaaa actatccgac 
     2401 gtaataaata tatcaagcaa aaacgaagga gtagtaaagg gaacgtggaa tatgcctacg 
     2461 gccgtgtgga taaatatttc atataaagaa ataaatctaa taccatttcc tctagaaaat 
     2521 ctagatctga tgagagataa catacttaaa gacacgggag ctaacagcga atatcaaatc 
     2581 agaagcacta caataagtcc gtacggagac ttggcaaaaa gatcagcaag cggaaaacta 
     2641 agcacaacta gtcccatgtt tggactagcc ctaaaaacat atcaaagcga tatcttcaac 
     2701 aattggatta ataccgaatg gctagacggt gaaggaggaa taaacgaaat aaccgctatc 
     2761 gatgtaagtt caggtagttt aacaatggac acgctgaacc ttgcaaaaaa agtttacgat 
     2821 atgttaaaca gaatcgcagt aagcggaggt acctaccaag actggattca aaccgtatat 
     2881 acaaacgatt acatcgaaag aagtgaaaca cctgtctacg aaggcggatt cagtagcgaa 
     2941 atcatattcc aagaagtaat aagtaacagc gcaacagaaa atgaaccatt agggacactt 
     3001 gccggacgcg gacaaaacac aggaatgaaa ggaggtactg taaaaatcaa aatcgacgaa 
     3061 ccaagctata ttatcggaat agtaagtatt acaccaagaa tcgactactc acaaggtaac 
     3121 agatttgacg tagatttaga tacattagac gatctacata aacctgcgct tgacgcaatc 
     3181 gggttccaag atcttactac aaacaaaatg gcatggtggg acgaaacaat aaccgcagac 
     3241 ggggaaaagc aactaaaatc cgtaggaaaa caacccgcat ggctggatta tatgacaaac 
     3301 tacaacaaag tattcggaaa ttttgcaatt aaagacagcg aaatgttcat gacattaaac 
     3361 agaaattatg aaatggacga aaataaatca atcgcagact taacaactta catagatcct 
     3421 gaaaaataca actatgtctt tgcagacaca agcttaaacg caatgaactt ctgggtacaa 
     3481 ctaggaatcg gagcaaaagt acgtagaaaa atgagtgcaa aagtaattcc aaacttataa 
     3541 aaaaaatact acaattatga aaacagcaag agtaataaac acttacaact taaaaagcgt 
     3601 agaaacatac gaaggcgaaa ccatagaaac gaaagtcgca agaatcgtac aagaaaaaac 
     3661 accaattaca gacggtgcac caatcatcta cacagataga gaacaaggca tattgccggc 
     3721 atacaacgtc agaaccgacc gttgggatat cgcagaaaac gcaatggata aaatcaacgc 
     3781 cgcaaaaatg gccaaacgtg acggcaattt cggtgaaaac gtacctgata aaatcgaagg 
     3841 aggtacacca agcgataatt aaaaaaggag ggtaaaaccc tcttcgctac gaggtacatt 
     3901 acggggagaa ttgtaaaaaa ttctcctcaa taaaacctta aaagtacgca cgtagcatta 
     3961 tatatctagt aaatagaaag acgattttaa aaaatcgcga aaacaatgta aatattaatt 
     4021 taaatcaaat cattatgtca ttctggagta aaataggaga cgcagtcaaa agcatcggaa 
     4081 aaggaatagt aaacatgata ccaggcttcg caataagtac agcaagcaac gccgtaggcg 
     4141 gagcaatgag tgccaaagac gcaaaacgcc aacatcaata cgacctcgaa aaaatggctg 
     4201 tacaacacgg ttacaacatc gaaagccaaa aactaggaca acaattcaac aaagaaatgt 
     4261 gggattacac caactacgag aaccaaaaaa aacatctaga agcagcaggg cttaacccag 
     4321 cactattata cggaatgggc ggaggaggag gagcaacagc agcaggagca caagggctag 
     4381 gcgcaggaat agcaagcggc cacgaaatgg gaatcaaaca gcaaggtaga ggaatgggac 
     4441 tacaaactgc agcaatagca agccaaatag acttgaacaa ctctcaagcc gaaaaaaaca 
     4501 gagcagaagc aaaaaaaacg gcaggagtag acacaaatct gcaaaacgca aacatcgaat 
     4561 atgtaatcgc tcaaacgtca aacgaaaaag tcaaaaaagg acttatatac gccaatacaa 
     4621 gactactaga tgcacaagaa gaattacaaa gaacatcagt agattacacc aaacaaaaaa 
     4681 ctgatgaagt acgctggaac ataaaactta tcgaaaaaga agtagacagg ctagccaaag 
     4741 aaataaacgg gttagaccta gataacgaat acaaaaaaga aacattaaaa aacaggatca 
     4801 cacaaacaag ccttgccata caacaagcaa ttgcagatat agcactaaaa ggttctcaag 
     4861 gaagattaaa cgatgcagaa gcaaaagcaa taccagaaaa gatactgcaa atgtgggccg 
     4921 aaatcagaac caaacaagaa agtgtagaag tatccaaagg acaaatggaa aattatgcac 
     4981 aagatatcgc aaacaggcta cacctaggag aaaaaggatt agacatacaa gaacaaaaat 
     5041 taataataga ctgtattaca ggactactca atatagccgt acaaggtgga ctcacaccaa 
     5101 tgggaaaagt cggctcaata gcaaaaggag gaaaataaaa tgtgtttgta tccaaaactc 
     5161 atacttaaca aaagatactg cagtacaaaa aagaacaagg gggttatacc tccttgtcct 
     5221 gatgaaagac tacgatatgt aacagcagca tgcggagagt gctacgaatg cagaaaacaa 
     5281 aaacaaagag catgggttac aagaatgacc gaagaattaa aacaaaatcc aaacgcaggg 
     5341 ttctacacat taacaatcga tgacgaacac tacaaaaaac tatcaaaaga atgcaaatca 
     5401 aaagacgaaa ataccatagc cacatatgcc ttaaggatgt ttttagaacg aatacgcaaa 
     5461 aaattaaaaa agagcgtgaa acactggtgt attaccgaat taggacacga gaaaagcgaa 
     5521 agattacact tacatggtat attctggggt tgcggaatag aatcaattat aagagagaaa 
     5581 tggcaaaatg gattcatctt cacaggaaac tacgtgtcac aacgcaccat caattatatc 
     5641 accaaatata tgctaaaaac ggatttagac cacccaaaat tcaaaggaaa agtactatgt 
     5701 agcgcaggaa taggaaaagg atac 
//
