FEATURES             Location/Qualifiers
     gene            200..364
                     /locus_tag="Alpa_01"
     CDS             200..364
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MKTLTKVGSDTSEAIKDATAKTEKGKGAEQDRSIKPQDKTGSYGEKRKPGDYLK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            484..1380
                     /locus_tag="Alpa_02"
     CDS             484..1380
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MYQKNIMLIPCGQCIGCRIRQREDWTTRIELEARDYPKEEVWFITLTYDDEHVPGMIVKTGEIMRKVQYVWKPGEKRPESVQTLLYTDIQKFLKRLRKAYRGKLRYFVAGEYGEQTARPHYHMILYGWQPTDLEHLYKIQHNGYFTSKWLADLWGMGQIQIAQAVPETYRYVAGYVTKKMYEIDGQKANAYYELGQQKPFACMSLKPGLGDHYYQEHKAEIWRQGYIQCTNGKHAQIPRYYEKMMEAENPQRLWRIKQNRQAAAIAENRLKYENTDFAEQCKTKERVIKKQMKKRGTL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL65809.1"
                     /inference="similar to AA sequence:INSD:CDL65793.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2406..2669
                     /locus_tag="Alpa_03"
     CDS             2406..2669
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MITSTKMKRSKAMMNKTWNVRDQPRESLERQLEKKYKEIDGNYRMLRKVSNIEDAKMLVDEIWQMKSFANTIELELMRREYNNGTTS"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2894..3031
                     /locus_tag="Alpa_04"
     CDS             2894..3031
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MAKDEKTFIGQAPEDYVGYKLAKFNDETGVFTNEKEKAWEGKPNE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP5"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3081..3422
                     /locus_tag="Alpa_05"
     CDS             3081..3422
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MRKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAMTGAEVDITEWPQNIHEYHRMIATAQANAMKLEELQKTATEEPKAETKTKEEEK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:MV_prot:putative.VP3"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3419..5104
                     /locus_tag="Alpa_06"
     CDS             3419..5104
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="VNRNNERHFNQIPEMKASRTRFNRDQTILTTFDSGKLIPFYVDEVLPGDTFSVDTSAIIRMTTPKYPVMDDAFIDFYYFYCPNRILWDNFKQFMGEVEETPWMPKQEYSVPKIVINGKEKSPEPYEDSILDYMGIPTKVKKVFKVNALPIRAYVKIWNEFFRDENVDNAATIKTDDASIDYQDGNESEDNTDDILKKAIGGGRCLPVNKFHDYFTSCLPYPQRGPEVTLPMQGNAPVGMYKNDSLTEFGTINGNSEIFLNQALNGSALAPKISNSFKEGARRALVTGSTNPTTQVSDAAYLAANLGETTATTINDLRKAVAVQQYYEALARGGSRYREQVQALWDVVISDKTVQIPEYLGGGRYHVNMNQIVQTSGQQSSTDTPIGETGAMSVTPVNESSFTKSFEEHGFIIGVCCVRHNHSYQQGLERLWSRTDRLDYYVPQFANLGEQPVKKKEIMLTGEASDEETFGYQEAWADYRMKPNRVSSKMRSNATGTLDFWHYADNYKSVPTLSQGWMAERKTEIARTLIVQDEPQFFGAIRVANKTTRRMPLYSVPGLYKL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65804.1"
                     /inference="similar to AA sequence:INSD:CDL65904.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 cacaccgggt ggaagcgccg gcacgatcag cggtgcaagt atgggacttg caagcagtag 
       61 tgcactagga gtaagccgga gcggtggatt tgtaccaaat gcatactcaa gctcaagctg 
      121 gagcaaaagc gactggtaca atgcggcaca aagctggcaa cagatgctaa gcacaacgca 
      181 aatgacaccc tacggactga tgaaaacact aaccaaagtc ggaagcgaca caagcgaagc 
      241 cattaaagat gcaacagcaa agacagaaaa aggcaaaggt gcagaacaag acagaagcat 
      301 aaagccacag gacaaaacag gaagctacgg agaaaaacga aagccaggtg attatttgaa 
      361 atgagttgtt acaagccatt aataaggctg tacaacccgg aagacaaaaa cataagcggg 
      421 cgggtgtatt cactcgcccg cttttctgaa atatcgggaa aacagctcaa atatgaagat 
      481 ttgatgtacc aaaaaaatat catgttgata ccatgcgggc aatgcatcgg atgcagaatc 
      541 agacaaaggg aggactggac aacacgaata gaattagaag cacgagatta tccaaaagaa 
      601 gaagtttggt ttatcacatt aacttatgat gacgaacatg taccgggcat gatagtaaaa 
      661 acaggtgaaa tcatgcgaaa agtacaatac gtctggaaac caggagagaa acgccctgaa 
      721 agcgtccaaa cgttgctata tactgacatt caaaagttct taaaacgtct cagaaaggct 
      781 tataggggca aattacgcta ttttgtagcg ggagagtacg gagaacagac agcaagaccg 
      841 cattatcaca tgatattata tggatggcaa ccaacagacc tagagcacct atacaagata 
      901 caacacaacg gatacttcac gagtaaatgg ctagcagact tatggggcat gggtcaaatc 
      961 cagatagcgc aagcagtacc cgaaacatat agatatgttg cgggatacgt tacaaaaaaa 
     1021 atgtacgaga tagacggcca aaaagcaaac gcatactatg aactagggca acagaaacct 
     1081 tttgcatgta tgagcctaaa gccaggttta ggcgaccact attaccaaga gcacaaagcg 
     1141 gaaatctggc gacaaggata tatccaatgc acaaacggca agcatgcaca aattccgcgt 
     1201 tattatgaaa aaatgatgga agccgaaaac ccacaaagat tgtggagaat taaacagaac 
     1261 agacaagcag cagcaatagc agaaaaccgg ctaaagtatg aaaacacaga ctttgcagaa 
     1321 cagtgcaaga caaaagaaag ggtcatcaag aagcagatga aaaaaagagg aacactctaa 
     1381 cggtgtcacc tagcccagta cctatcaagt aaggtactgg gctaggtgtc gtttaaagac 
     1441 tctatgtatc agcctattca gtctatcaaa tagctatact ttatcgcgcg tgcgcacgcg 
     1501 cgcgaagcgc gcacgcgcgc acgcgcggct cttcggcact attgctcgca agctcacaag 
     1561 tgccgtataa tatataactt gttgtaggag tagtagtaga ggtggtggaa aagttgaaaa 
     1621 gtactaaaat ttaacgctaa agcgtaaata aaaagcaaaa aacactgtta aaagttttgt 
     1681 taaaaacttg ttgaattgtt aaaagttcgt caaaatgacg gaaatcattg tgcaacattt 
     1741 tgtggaaaac ctgttgaaag tgttgaaagt gttgaaaacg cgcacagcgc taaaaaggaa 
     1801 tggattagcc gagttccgca tgcgctccac acggcaaggc gctaaagcgc cattcaaacc 
     1861 aaaaaacaat tgacgtgtgg taaaatatac ggtataattc acaatagaag gcgagggatc 
     1921 aagatgataa aaagctatat catggacaaa gacgcaaacg aaaaagttgg acagcacttc 
     1981 aaagtaaagg aattcgcttg caaagacggt tcacaggtag tttttataga cagttaccta 
     2041 gtgtcaatcc tagacatcct cagaaacgaa gtcggaaaac ctgtaatcat caacagcgga 
     2101 tacaggaccc cgtcaaggaa taaagaagta ggcggtgcga aatactcata ccatatgcgc 
     2161 ggtatggccg cagacattca aataggtgga atgagcgcaa aagaaattgc caacaaactg 
     2221 aacaaaatca ttccgtacga atgcggcatt atcgtataca aaagctgggt gcacatagac 
     2281 acacgcacca gcaaatacag aaagggggta taaaatggca ctgatttcca ttaaagacgt 
     2341 caaacaggca atccgcatta tgatgcagat tctcgaaaag cttgacgaaa tctatcacgc 
     2401 gctgcatgat aacatcaacg aaaatgaaaa ggagtaaagc catgatgaac aaaacatgga 
     2461 atgtaagaga ccagcccaga gaatcattgg aaagacaact cgaaaaaaaa tacaaagaaa 
     2521 ttgatggcaa ttacagaatg cttagaaaag tgtcaaacat cgaagacgca aaaatgctag 
     2581 tggatgagat ttggcaaatg aaaagttttg caaataccat tgagttagag ctaatgcgaa 
     2641 gggagtataa caatggcacg acatcgtaaa gcaatgaacg gcgcaaaaga ccgccgcatg 
     2701 ttcaacgtaa ccgcaaaaaa gacgaaaact atcaacctta gccagaagcc catgcgcggc 
     2761 ggcgtccgac tgtaaaagaa aggaaaagac aatggaacat ctgtattacg gaatttggga 
     2821 cagtgtagca aagtgttatg catgggtagg cgagaacaag agcaacgcaa cctttgcacg 
     2881 catgtgcaac gtaatggcaa aagatgaaaa gacctttatt gggcaggcgc cggaggacta 
     2941 cgtcggctac aagctggcaa agttcaacga cgagaccggc gtcttcacca acgaaaaaga 
     3001 aaaagcgtgg gagggcaagc ctaatgaata agcgatacga agaagggcga gagcccttct 
     3061 tttctgaatc aggcgaaaag atgcggaaac agtacgtctg gacgaaagac gaaaaaggac 
     3121 aagaagtact ccaagaaact gcaccaatcg acatccaaca ggaaattgaa agctatgcgg 
     3181 atgaatgcga tatcaaaagc atcatccgaa aagcaagttt tgacccgcag tttctgaaaa 
     3241 gcctgtcaga aggagcaatg acaggggcag aagtagacat caccgaatgg ccgcagaaca 
     3301 ttcacgaata tcatcgcatg atcgcgaccg cacaggcaaa cgcaatgaag cttgaagaac 
     3361 tgcaaaaaac ggcaacggaa gagccaaaag cggaaactaa aacgaaggag gaagaaaagt 
     3421 gaaccgaaac aatgaacggc acttcaacca aatcccggaa atgaaagcaa gtcgaacacg 
     3481 attcaaccgt gaccagacta ttctcacaac gttcgactcc ggcaagctga ttccatttta 
     3541 tgtggacgaa gtattgccgg gcgacacatt tagcgtggac acaagcgcaa tcattcgaat 
     3601 gaccacaccg aaatatccgg tgatggacga tgcattcatt gacttctatt acttctattg 
     3661 cccaaaccga atcctatggg ataatttcaa gcagttcatg ggagaagtag aggaaacacc 
     3721 atggatgccg aaacaagaat atagtgtgcc caaaatcgtc atcaacggca aagaaaagag 
     3781 tccggagccg tatgaagact caatcctaga ttacatggga atcccaacga aagttaaaaa 
     3841 agtttttaaa gtaaacgcac taccaatcag agcatatgta aaaatctgga atgaattttt 
     3901 cagagacgaa aacgtagata atgcagcaac catcaaaacc gatgacgcca gcatagacta 
     3961 tcaagacggc aacgaaagcg aagacaacac agacgatatc ttaaaaaaag caataggcgg 
     4021 tggcagatgc ttaccagtaa acaagttcca cgactacttc accagctgtc tgccttatcc 
     4081 tcagcgcggg ccggaagtaa cgctgccgat gcagggcaat gcaccagttg gaatgtacaa 
     4141 aaacgatagt ctaaccgaat ttggaacgat aaacggaaac agcgaaatct tcctcaacca 
     4201 agcactaaat ggaagcgcac tagcaccaaa aatcagtaac agctttaaag agggagccag 
     4261 aagagcactg gtaacaggta gcacaaaccc gacaactcaa gtaagtgatg cggcatacct 
     4321 agcagcaaat cttggagaaa ccactgcaac aaccatcaac gacctgagaa aagccgtagc 
     4381 agtacagcag tactacgaag cacttgcaag aggcggcagc aggtaccgcg aacaggtaca 
     4441 ggcgctgtgg gatgtggtaa tctcagataa aaccgtgcag attccggaat accttggcgg 
     4501 tggcagatac catgtaaaca tgaaccaaat cgtgcagaca agcggacagc agagcagcac 
     4561 ggacacacct atcggtgaaa ctggtgcaat gtcagtaacg ccggtcaatg aaagcagttt 
     4621 tacaaaaagc tttgaggagc acgggtttat aatcggtgtc tgttgtgtac gacacaatca 
     4681 cagttaccag caggggcttg aacgtctctg gagcagaacg gacagactgg actattatgt 
     4741 acctcagttc gcaaacttag gtgaacagcc tgtaaaaaag aaggaaatca tgctcaccgg 
     4801 cgaggcaagc gatgaagaaa cttttggtta ccaggaagca tgggcagact accgaatgaa 
     4861 acctaaccgc gtatcaagca aaatgagaag caacgcaacc ggaacgttag atttctggca 
     4921 ctatgccgac aactataaaa gtgtaccaac actgtcgcaa ggatggatgg cagaaagaaa 
     4981 aacagaaatt gcacgcacgc tcattgttca ggatgagccg cagtttttcg gagcaatccg 
     5041 agtagcaaac aaaacaacaa gacggatgcc gttgtacagt gtaccgggct tgtacaaact 
     5101 gtaagaaagg aggaagcccg gaggaatccg ggctattttt taaatgggag cattgtcagg 
     5161 aattttaacc ggtttaaacg tagcgggaaa cgtggcaagt acaatcggaa caatcgccgg 
     5221 agcagcaaaa gacgttgcag gaatattcgg cggctggggt caaaccggta acagccaaag 
     5281 ccagggcggg agcgtaagtc aaggcggtgg acattccgag agcggaagtc atgcgggcac 
     5341 aaacatccaa caggtaaatg actggcttaa acaggcatac gcataccaag ggcaagaagc 
     5401 agccatgcaa ggtaaataca acagccaaag catgttaaag caaatggggt acaacacctt 
     5461 acaagcaatc atgcaaggcg tatacaacca cattgaaaca gcg 
//
