FEATURES             Location/Qualifiers
     gene            complement(230..2068)
                     /locus_tag="Alpa_01"
     CDS             complement(230..2068)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MAGLFSYGDIKNKPRRSGFDLGNKNAFTAKVGELLPVYWKFCLPGDKFKISQEWFTRTQPVDTSAFTRIREYYEWFFVPLHLMYRNSNEAIMSMENQPNYAASGTQSITFNRKLPWVDLLTLNNAVENVKASTYHDNMFGFSRALGFAKLYNYLGVGQVDPSKTLANLRISAFPFYAYQKIYNDYYRNSQWEVNKPWTYNCDFWNGEDTTPVASSKDLFDTNPNDSIFELRYANWNKDLYMGAMPNAQFGDVAFVPVDSSGKLPVSLPSIEVGGVAPIYNTGAGGVQPDAQIGLRGAVTGAPDNGQTVTAYGADKTDAARPYFYAVPDGSVAHLKTNAKTIQVPYEFSSKFDVLQLRAAECLQKWKEIAQANGQNYASQVKAHFGVSPNPMTSHRCQRVCGFDGSIDISAVENTNLSSDEAIIRGKGIGGYRVNKPETFKTTEHGVLMCIYHAVPLLDYAPTGPDLQFMTTVDGDSWPVPELDSVGFEELPSYSLLNTSDVQPIKEPRPFGYVPRYISWKTSVDVVRGAFIDTLKSWTAPIGEDYMKIYFDNNNVPGGAHFGFYTWFKVNPSVVNPIFGVVADGSWNTDQLLVNCDFDVRVARNLSYDGLPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2074..2283)
                     /locus_tag="Alpa_02"
     CDS             complement(2074..2283)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MAYDIDIETFPTIHNDIVDGIPESYVHYFKQYLYEIEDRRISQNTDVSVRPLDALSETGIIQLKFNFID"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2283..2678)
                     /locus_tag="Alpa_03"
     CDS             complement(2283..2678)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MYRPKYFSFTEMILTASTAQENNLPDWDDINRLLELCRWILDPVREMYGKPIVVTSGFRTPFLNRLVGGVSTSQHMQGLAADLRCDDPKALFDLIAESDLPFDQLIYYQKKKFVHVSYSPTYRHEVIVKDN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase.M15A"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase"
                     /inference="similar to AA sequence:INSD:WP_010803336.1"
                     /inference="similar to AA sequence:INSD:WP_028728351.1"
                     /db_xref="InterPro:IPR013230"
                     /db_xref="InterPro:IPR009045"
                     /db_xref="eggNOG:bactNOG163302"
                     /db_xref="eggNOG:bproNOG20824"
                     /db_xref="eggNOG:NOG79001"
                     /db_xref="eggNOG:proNOG95037"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2681..2833)
                     /locus_tag="Alpa_04"
     CDS             complement(2681..2833)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MEKQFYLVLLHYGSEVSSKVVISLDRLDSFLSRGYTVEFVQPIRVLSDEL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2840..4450)
                     /locus_tag="Alpa_05"
     CDS             complement(2840..4450)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MISPVVKPYCSCLHPVIIKNRYTGDPIYVECGECEVCLSNKAIQKELRCNIQLASSRCCFFVTLTYATVHIPVARFYKLNDSYHLCCVPRDHVYTYVTSQGYDREMSFCDEEFDCPTNLSDKAVTDLLAKTHLDRTVYPDGRSVVKYPNMVDLLPYLNYRDVQLFHKRINQQIKKYTNEKIHTYTVGEYGPKTFRPHFHILFFFDSERLAQIFGQLVDKAWRFGDSDTQRVWSSASSYVAGYLNSYLCLPEFYRYNRKIAPFGRFSQHFAERSFIEAFKPEENTEIFDKFVDGIYLSLGDKPTLCRPKRSLINRLYPILDRSSVSDVDSNVRTALFVSKIPQVLARYGFLDEVTLFEQAKRTFFVIKKYLQVDHSLDNAPEALRFIYNACRLSLYLNFSELEGCSAVYRLFLAYRNLCDHWITVPSNHIAFYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQNNYLSTQVDFRYFYPLTDGELMCNSYREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLIAECDRH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4946..5146)
                     /locus_tag="Alpa_06"
     CDS             complement(4946..5146)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MDRWSQDPVKARWDRGINNAGKFIDGLSNIVGAVTKFGSFRREGRSVIEQFDDNQGYSSTRQRYRR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 cttttgacca aacaaatgcc atagtctgaa cagaaagtaa cagaaccatc tgcattatga 
       61 tcaaatagaa aatcaccaac gggattaggt tcaggcaaaa caccctgagc aagcatttca 
      121 gaggtcacaa cacaccgaca actctgcgag tgatcggaaa tatcagagtt aagcgaatat 
      181 ttcgcaaaac ctcttaaggg agtaactttt tcagacataa cgataaatat taataaggta 
      241 aaccatcgta agacaaattg cgagctacac ggacatcaaa atcacaattg acaagcaatt 
      301 gatcagtatt ccatgaacca tcagcgacaa caccgaaaat aggattgaca acagacggat 
      361 tcactttaaa ccacgtatag aagccaaaat gcgcaccacc gggaacattg ttattatcga 
      421 aatagatttt catataatcc tcaccaatcg gagcagtcca agattttaga gtatcaataa 
      481 aagcacctcg cacaacatca acagacgttt tccaactgat ataccgagga acataaccga 
      541 aaggcctagg ctctttaatc ggctgaacat cagaagtatt caacaaagaa taagacggaa 
      601 gttcttcaaa accgacagaa tctaactcag gaacaggcca tgaatcacca tcaacagtag 
      661 tcataaactg caaatcagga ccagtcgggg cataatccaa aagaggcaca gcatgataaa 
      721 tacacatcag aacaccatgc tcagtagttt taaatgtttc gggtttattt acacgataac 
      781 cgccaatacc tttaccgcgg ataatagcct cgtcagaaga aaggtttgta ttttcaacag 
      841 cggaaatatc aatcgaacca tcaaaaccac aaacacgctg acagcggtga gatgtcatag 
      901 gattaggaga aacaccaaaa tgtgccttca cctgagaagc ataattttga ccatttgcct 
      961 gtgcgatctc tttccatttt tgaagacatt cagcagcacg aagctgaaga acatcaaatt 
     1021 tcgatgaaaa ctcgtaagga acttgaatag tcttagcatt ggttttcaga tgggcaacag 
     1081 agccatcagg aacagcataa aaataaggac gtgcggcgtc agttttatca gcaccgtaag 
     1141 cagtaacggt ctgtccatta tccggcgcac ctgtaacagc accacgtaaa ccgatctgag 
     1201 catcaggttg aacaccgcca gcacctgtat tataaatagg agcgacaccg ccaacttcga 
     1261 tagacggaag actgacagga agtttaccgg aagaatcaac aggaacaaaa gctacatcgc 
     1321 caaactgagc attaggcata gcacccatat aaagatcttt attccagttg gcgtaacgaa 
     1381 gttcaaaaat tgaatcattc ggattggtat caaaaagatc ttttgaagaa gctactggtg 
     1441 tagtatcctc accgttccaa aagtcacagt tataagtcca aggtttattc acttcccatt 
     1501 gagagttccg atagtaatca ttataaattt tctgataggc atagaacggg aaagcagata 
     1561 tacgaagatt agcaagcgtc ttagacggat caacttgacc aacaccaaga taattataaa 
     1621 gttttgcaaa gccaagagca cgactaaaac caaacatatt gtcatgatat gtagaagcct 
     1681 taacattctc aacagcatta ttcaaagtca gaagatcaac ccaaggaagt ttgcgattga 
     1741 aagtaatact ctgagtacct gatgcagcat agttaggttg attttccatt gacataatag 
     1801 cttcgtttga atttctatac atcaagtgaa gaggtacaaa gaaccattca taatactcac 
     1861 gaatacgggt aaatgcagaa gtgtcaacag gttgtgtacg tgtaaaccat tcttgcgaaa 
     1921 tcttaaactt atcacctggg aggcaaaatt tccaataaac aggcaaaagc tcaccgacct 
     1981 tagcggtaaa agcattttta ttacctaaat caaatcctga acggcgaggc ttatttttaa 
     2041 tatcgccgta agaaaaaaga ccagccataa aaattaatct ataaaattaa acttaagttg 
     2101 aattatcccc gtttccgaaa gagcgtcaag aggtctaaca gaaacatcag tattttgcga 
     2161 aatacgccta tcctcaattt catataagta ctgtttaaaa taatgaacat aactttcagg 
     2221 tatcccatct actatatcat tatgaatagt agggaaagtc tcaatatcaa tatcgtaagc 
     2281 catcaattat cctttacaat aacttcatgc cgataagtag gagaatagga cacatgaacg 
     2341 aacttcttct tctgataata gatcaattga tcaaaaggaa gatcagattc agcgataaga 
     2401 tcaaagagtg ctttcgggtc atcacaacga agatcagcag ccaaaccttg catgtgttgc 
     2461 gaagtagaaa caccaccaac taaacggtta aggaacggag tacggaaacc tgaagtaaca 
     2521 acaataggtt taccatacat ctcacgaacc ggatcaagta tccaacggca aagctcaagc 
     2581 agacgattaa tatcatccca atcaggaaga ttgttttcct gagcagtaga cgccgtaaga 
     2641 atcatctcag tgaaagaaaa atacttaggt ctatacatag ctacaattca tcagataaaa 
     2701 cacgaatagg ctgaacaaat tcaacagtgt aaccacgaga caaaaaggaa tcaagacgat 
     2761 ctaaagaaat aactacctta gacgaaacct cactaccata gtgaagaaga accaaataaa 
     2821 attgtttttc cataataaat caatgtctat cacattcggc gatcaatacg caattcaaat 
     2881 cattgagata tttgtgcttt atacgctgtc gattatccgc agcaacctct gcataggcgg 
     2941 ctcgacaaaa cggagataaa gccagcactt cacgataaga attacacatc aactcgccgt 
     3001 cagtaagtgg ataaaaatat ctaaaatcaa cctgagtaga caggtaattg ttttgagacc 
     3061 acgaccgaac ctttagaagc tgatcatgaa gatgtttaga atccatatag ctataaaagg 
     3121 cataaatcgt tcggaacgcc ctacgtaatt gaccataaaa agcaatatga ttggacggaa 
     3181 cagttatcca atgatcacaa agattacgat aggccaaaaa caagcgatac acagcagaac 
     3241 atccctctaa ttcgctaaaa ttgagataca aagataaacg acaagcattg tagatgaaac 
     3301 gaagcgcttc gggggcattg tccaaactgt gatcaacttg caaatatttt ttaataacaa 
     3361 agaaagtacg cttagcctgc tcaaacaaag tcacttcatc aaggaatcca taccttgcga 
     3421 ggacttgagg tattttagag acaaagagcg cagttctaac gttagaatca acatccgata 
     3481 cagaagagcg gtcaaggatg gggtataatc gattgataag cgaccgctta ggccggcaaa 
     3541 gtgtaggctt atcaccgaga gagaggtaaa ttccatcaac gaacttatcg aatatttccg 
     3601 tgttttcttc gggcttaaaa gcttcgataa acgagcgttc cgcaaaatgc tgtgaaaaac 
     3661 gtccgaatgg cgcgattttt ctattatatc tataaaattc gggaagacag agatagctat 
     3721 taagatatcc cgcaacgtac gatgaagcgg aagaccatac acgttgcgta tctgaatcac 
     3781 caaagcgcca tgccttatcc acaagctgtc caaatatctg ggcgagccgt tccgagtcaa 
     3841 agaaaaataa gatatgaaaa tgcggacgga atgttttagg accgtattca ccgacagtgt 
     3901 acgtatgaat cttttcattt gtatattttt ttatttgttg attaattctt ttatgaaaca 
     3961 gttgaacatc tcggtaatta aggtagggta acaaatcgac catattagga tacttaacaa 
     4021 cagaacgacc atcaggataa acagtcctat caagatgtgt tttagccaag agatcggtaa 
     4081 cagctttatc actgagatta gttggacaat caaattcttc atcacaaaaa gacatttcac 
     4141 gatcatatcc ttgagatgta acatacgtgt aaacatgatc acgaggtaca caacaaagat 
     4201 ggtaagaatc attaagttta taaaacctag caacaggtat atgtactgtg gcataagtca 
     4261 aagttacaaa gaaacaacaa cgagaagatg caagctgaat attacaacga agttcctttt 
     4321 gaatagcttt attagaaaga cacacctcac attcaccaca ttcaacatat atgggatcac 
     4381 ctgtatatct gtttttaata ataacaggat gcaaacaaga gcaatatggt ttaactactg 
     4441 gactaatcat atacaaagat aaacgataaa aattgaaatg tgcaagcaaa cgtttttttt 
     4501 taactataaa ttaacatcaa gaacatacct atatatatag tgatgtcact tttgcttatc 
     4561 ctgaacaagg aaggtttgaa tcggaaataa cagttaatcc gatttgcttt cgcacaaaag 
     4621 tgaagagaac tacgtaccaa atctaaatat tagttaataa aatggaggat attcgcgaaa 
     4681 atatttacaa aaaaaacggg gatcgccact ttatgatgcc tccggcggcc acggctacgg 
     4741 cccgtggacg gccgacgttt ttttcatgct cgactcccgt ctcgtcatag agatttaggg 
     4801 agcgtgcctg ctccccccaa aggggccccc catgcgctgg acggaaagag gggacagaac 
     4861 gaagagtgaa gcaggagggc caaacggcta aaggccgact tatcacaagc cagccgatag 
     4921 taattaacca acaaaagtaa acaaactacc tacgatagcg ttgacgagta gaagaataac 
     4981 cctgattatc gtcaaattgt tctatcacag aacgaccttc acgacggaaa gaaccaaact 
     5041 tagtaacagc accaacaata ttagagagac cgtctataaa cttgccagca ttattaatac 
     5101 ctctatccca acgagcttta acgggatcct gagaccaacg gtccatc 
//
