FEATURES             Location/Qualifiers
     gene            22..1548
                     /locus_tag="Alpa_01"
     CDS             22..1548
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="LDEVLPGDTFKIKTSKVVRLQTLITPMMDNLYLDTYFFFVPNRLVWSHWKEFNGENTQSAWLPTTEYEIPQITAPATGGWSIGTIADYLGIPTGVPDLSVNALPFRAYALVMNEWFRDENLTDPLVVPLDDATVAGVNTGAYVTDVAKGGLPFVAAKYHDYFTSCLPAPQKGPDVVIPGGTGMSVPVIPQADKVPSGLITMPYTATFLNETPVRSTTGIFFNDSGSQTNGVSAGSSEDALPVIDNLWAVGDGVATATINQLRLAFQIQKLYEKDARGGTRYTEILRSHFGVTSPDSRLQRPEYLGGNRIPIRINQIVQQSATQEGSTPQGNPVGLSLTSDNHGDFTKSFTEHGFILGLMVARYDHTYQQGLDRMFSRKSRFDYYWPVFANIGEQAVLNKEIYAQGTNEDDEVFGYQEAWADYRYKPNRVCGEMRSQAPQSLDVWHLGDDYSKLPSLSDEWIREDKTNVDRVLAVQSSVSNQLFADIYVQNRCTRPMPMYSIPGLIDHH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65928.1"
                     /inference="similar to AA sequence:INSD:CDL65904.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1561..2535
                     /locus_tag="Alpa_02"
     CDS             1561..2535
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MATSASGVANNVSILDDYQPNAVYQANQAFDQINATTNANNAWSAAQAEKQMDFQREQNKAAMDFNAAEAAKNRDWQKMMSDTAHQREIRDLQAAGLNPILSATGGNGAAVTSGATASGVTSSGAMGQTDTSKNSAIVQLLSSMLQYKNNLDMANINAQTNLAVADKYNAMSKYMSELNAATNLQTAGMSAAASRDVAGINASASRYASDVHLQAQQYASDIQSYTSKVVASINAEASDRNSTRASKATQYAASLNAAAQRYATDQNNATRTALQEAQQQFQEYMRKYYADSPWSSLTSSLGMMLGVNRSDFSTGGFTQGFGSR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:CDL66940.1"
                     /inference="similar to AA sequence:INSD:CDL65860.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2934..3641)
                     /locus_tag="Alpa_03"
     CDS             complement(2934..3641)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MVIVKASCRASQLLGHIPGSIRTGLPGDLRYNSTANRLLDTIITFDAPTCLQGRGEIKDEPSLRISLINLEIIQMQAEQDHMIMRPKRMGTILASSIEPNTIIRERLPKTLHEQLQITLPKGKRRDHFTSLRITITAAGDMIIVIRQGCKPGAIMILQLQKTTVGPFAGILHPAANTLTTWDLNTFTNYTLCHRSALLDMDGRPNTTHKLHVIHTITGDLVIDFPSLRNTNRETL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3594..3974
                     /locus_tag="Alpa_04"
     CDS             3594..3974
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="VTKKLTGPAACFYDDHNIEPPFTQMSLKPGIGRNYYDNHPDLYKYEYINVSTAKGGRKFRPPKYFDRIFDVEYPDESAAMKEARKRIAMDARQAKLAQTNLSYIDLLAVEERALKERIKSLKRRLD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL66943.1"
                     /inference="similar to AA sequence:INSD:WP_024251053.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4085..4228
                     /locus_tag="Alpa_05"
     CDS             4085..4228
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="VKLYCIFLDGMLYGCLKERDDMLSFLQEWDFEVAPSVFIELQEVEFK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4469..4957
                     /locus_tag="Alpa_06"
     CDS             4469..4957
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MRKFRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTLLRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSEFMASMDGPDFWRKLGVVQSAQETPSPGCSKVVHSAEKEDE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP3"
                     /inference="similar to AA sequence:INSD:CDL65858.1"
                     /inference="similar to AA sequence:INSD:CDL65903.1"
                     /db_xref="InterPro:IPR014131"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 cgacgtcact tccctttctt tttggatgag gttttgcccg gcgatacctt caagatcaag 
       61 acctcgaagg ttgtacgtct ccagaccctg atcacgccca tgatggacaa tctttatctg 
      121 gacacatatt ttttctttgt gcccaaccgg ctcgtgtgga gccactggaa ggagtttaac 
      181 ggtgagaata cccagtctgc gtggttacct acgacggagt atgaaatccc tcagatcacg 
      241 gctccggcga ctggcggatg gtctatcgga acgattgctg attatctcgg tattcctact 
      301 ggtgtacctg acctctcagt taacgcatta cctttcagag cgtatgctct ggtcatgaat 
      361 gagtggttcc gtgatgagaa tctcactgat cccctcgttg tccccctgga cgatgcgaca 
      421 gtggcaggcg tgaacactgg cgcctatgtg actgacgttg cgaaaggtgg ccttcccttt 
      481 gttgctgcga agtatcatga ctactttacg tcctgcctcc cggctccgca gaagggccct 
      541 gatgttgtga ttcccggcgg cactggtatg tctgtgccgg tgattccgca ggctgataag 
      601 gtgccttctg gtttgattac gatgccgtat acggcaactt ttttgaatga aactcctgtt 
      661 cgtagtacca ctggtatttt tttcaatgat tctggttcgc agacgaatgg tgtatctgct 
      721 ggatcttctg aggatgcatt gcctgttatt gataaccttt gggctgttgg tgatggtgtt 
      781 gcaaccgcta cgattaatca gctgcgcctg gctttccaga tccagaagct ctatgagaag 
      841 gacgcccgcg gcggtacccg ctatacggag atcctccgtt ctcattttgg tgttacctct 
      901 ccggattccc gcttgcagcg ccctgagtat ctcggcggca accgtatccc gatccggatc 
      961 aatcagatcg tgcagcagtc tgctacccag gaaggctcta cgccccaggg caatcccgtc 
     1021 ggcctgtccc tcacctcgga caatcacggc gatttcacga aatcttttac ggagcatggc 
     1081 tttatcctcg gcctgatggt tgcccggtat gaccatacgt atcagcaggg cctcgaccgg 
     1141 atgttctccc ggaagtcccg cttcgattat tactggccgg tctttgcgaa tatcggtgag 
     1201 caggctgtgc tcaacaagga gatctacgcc cagggcacga atgaagatga tgaggtcttc 
     1261 ggctaccagg aagcctgggc agattaccgt tataagccca accgcgtttg tggtgagatg 
     1321 agatcccagg ctccgcagtc cctggatgtc tggcacctcg gagatgatta cagcaagctg 
     1381 ccttcccttt ccgatgagtg gatcagagaa gacaaaacga atgtggatcg tgtcctggct 
     1441 gtccagtcct ccgtctcgaa tcagctcttt gctgatatct acgttcagaa ccggtgcacc 
     1501 cggccgatgc ccatgtattc cattcccggc ctgatcgacc accattaaag gaggtgcctt 
     1561 atggctacgt ctgcctctgg tgttgcgaat aacgtctcga tcctggatga ctatcagccc 
     1621 aatgccgttt accaggccaa ccaggctttc gatcagatca acgctaccac caatgcgaac 
     1681 aacgcctggt cagctgccca ggcagagaag cagatggatt tccagcgtga gcagaacaag 
     1741 gctgccatgg acttcaatgc ggccgaggcc gccaagaacc gtgactggca gaagatgatg 
     1801 tccgatactg cccaccaacg tgagatccgc gatctgcagg ctgccggcct taatccgatc 
     1861 ctgtctgcca ctggcggcaa tggtgccgcc gttacctccg gagctaccgc ctccggcgtt 
     1921 accagttctg gtgctatggg tcagaccgat accagcaaaa attctgctat tgtacaattg 
     1981 ctttcaagta tgttacaata caagaacaat ttagatatgg caaatattaa tgctcagaca 
     2041 aatttagctg tagctgataa atataatgct atgtctaagt atatgtcaga gttaaatgct 
     2101 gctactaatc ttcaaactgc tggtatgtca gctgctgctt cccgtgatgt tgcaggcatc 
     2161 aatgcctcgg cgtctcgcta tgccagcgat gtgcatttgc aagcccagca gtacgcgtct 
     2221 gatatccagt cgtatacttc aaaggtcgtt gcctcgatca atgccgaagc atccgatcgg 
     2281 aactccaccc gtgcttccaa ggccacccag tatgcagctt ctctgaatgc cgctgcccag 
     2341 cggtacgcaa cggatcagaa caatgctacc aggactgcgc tccaggaagc ccagcagcag 
     2401 ttccaagagt atatgcgtaa gtattatgct gattctccgt ggtctagttt gacttctagt 
     2461 cttggtatga tgcttggtgt aaaccgttct gatttttcga ctggcggatt tacgcaaggt 
     2521 tttggaagta ggtgagtttt tggctattga tacggtgtat gctttaacga gtttgcttat 
     2581 tttagctttg ctggcatctc ctgttgttgc acttatcatt gctgtcatta aatggctcaa 
     2641 ccgtcactga gcggtaggat ctccgatgaa aacccccggc cctgtgccgg gggttttgca 
     2701 gtcggcgcag aagctacccc cgagggtctg ggaacagttc cccttgattt aactgttccc 
     2761 agtgacacca aagctttgac acgcccccct atcctgtgct atgatggtct taccgaggaa 
     2821 ggaaaattat ctggagaaaa ctggatatgc tacaaaacgt ttattttgtt gcgttcgtcc 
     2881 tttcttggaa tctgaacatt ttgaggagga ttgttgtgcc gtgttaccat ccgttaaagg 
     2941 gtttccctat tggtattacg aagactggga aagtcgatta caagatcacc ggttatggtg 
     3001 tggatcacgt ggagcttgtg cgtggtattt ggacgcccgt ccatatcaag gagcgcggat 
     3061 ctatggcaca gcgtgtagtt cgtgaaagta ttgagatccc atgtggtcag tgtattggct 
     3121 gccggatgca gtattcccgc gaatgggcca accgttgtct tctggagctg gaggatcatg 
     3181 atagcgcctg gtttgcaacc ctgacgtatg acaatgatca tgtcccccgc agctgttatg 
     3241 gtgatcctga gactggtgaa gtgatcccgt cgctttccct tcggaagcgt gatttgcagc 
     3301 tgttcatgaa gcgtcttcgg aaggcgttcc cggatgatcg tattcggttc tatgctgctg 
     3361 gcgagtatgg ttcccatacg tttcggccgc attatcatgt gatcctgttc ggcctgcatt 
     3421 tggatgatct ccagatttat gagcgagatc ctgagactgg gttcgtcctt tatctctccc 
     3481 cttccctgca ggcatgttgg agcgtcaaag gtgatgatgg tgtcaagaag cctattggcc 
     3541 gtgctgttgt atctgaggtc tcctgggaga cctgtgcgta tactgccagg tatgtgacca 
     3601 agaagctgac tggccctgca gcttgctttt acgatgacca taatattgag cctccgttca 
     3661 cgcagatgtc tctcaagccc ggcattggcc ggaattacta tgataaccat ccggatctgt 
     3721 acaagtatga gtatatcaac gtgtctacgg caaagggcgg ccggaagttc cgccctccga 
     3781 agtatttcga tcggatcttt gatgtggagt acccggatga atcggccgct atgaaagagg 
     3841 cccgtaagag gattgctatg gatgcccggc aagccaagct ggcccagacg aatttgtcct 
     3901 atatcgattt gttggcagtt gaggaacgcg ccctgaaaga gcgtatcaaa tcattgaaaa 
     3961 ggaggttgga ttagatgcgg aagaagatgc gaaaaggtaa ggatcagcag gtgtttaagc 
     4021 gcactgctgc gaagtccaag aagatcaata ttaacccgac aatttatcgt ggaggtattc 
     4081 ggttgtgaag ttgtactgca tttttttgga tggtatgctt tatggttgtt tgaaagagcg 
     4141 tgatgacatg ctctcttttt tgcaagagtg ggattttgaa gttgctccgt ccgtttttat 
     4201 tgagttacag gaggttgagt tcaaatgaaa tttcaaattt atgcgattcg tgacattcat 
     4261 acgggcttta tgtcgccgac cgtggatcag aacgatgctt gcgcaatgcg taattttgct 
     4321 cacgctgtac gcaatccttc gtctctcatg aactcccata cggcggatta tcagctgttc 
     4381 cagctcggta cctatgatgt cgataccggc gagatcgtgc cctgtgttcc ccgcctggtt 
     4441 gttgccggct cttctctgga ggtgtgatat gcggaagttt cgtactcagt ttgatgagca 
     4501 tcctcgttat cagtgttgca ctggatctcg tattaaaaag ttgtatgctc ctcgttttga 
     4561 tgagaatggt gtgatggatc tcgttgagaa aggcgaggag aacctgtatg agtatatcca 
     4621 gagttacaag gattccgtgg atatcaatac cctgctgcgg cgctatgcgc aaggagatcc 
     4681 cgatgctctc tctcgtgttc aggcagctta cggtgatttt accggtcttc cttctactta 
     4741 tgctgatctg cttaatgctg tcaatgatgg caagcagtat tttgaaagcc tgccggtgga 
     4801 tgtccgtgct cagtttaacc atagtttttc tgagtttatg gcttctatgg atggccctga 
     4861 cttttggcgt aagctaggag ttgtgcaatc tgctcaagaa acaccttcgc ctggttgttc 
     4921 aaaagttgtg cattctgccg aaaaggagga tgaatgatga atcggaatgt ggaatcccat 
     4981 tttgctcagc tgccccatgc tgatatccgg cggtctcagt ttgaccgctc cagctcggtg 
     5041 aaaacgtctt tcaacg 
//
