FEATURES             Location/Qualifiers
     gene            130..312
                     /locus_tag="Alpa_01"
     CDS             130..312
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MEALRKLRQDNDINAFRYSMERVFGNSSDVKDVASELVKRMGLLLMRPDIKELDQMFNPK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:INSD:WP_022322418.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            535..1371
                     /locus_tag="Alpa_02"
     CDS             535..1371
                     /product="putative replication protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MYLASVEAKVPCGWCVNCRQNKRQSWVYRLQAEAKEYPLSLFVTLTYDDEHLPIERIGSDLFQTNVAVVSKRDVQLFMKRLRKKYEDYKMRYFVTSEYGAKNGRPHYHMILFGFPFTGKMAGDLLAECWQNGFVQAHPLTIKEIAYVCKYMYEKSMCPEILRDEKKYKPFMLCSRNPGIGFGFMKADIIEFYRRHPRDYVRAWAGHKMAMPRYYADKLYDDDMKAFLKEMREEFFRHKMFNEWIDYCARENPILTDLMQLEQREEYEKRMNERLRCKM"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022322419.1"
                     /inference="similar to AA sequence:INSD:WP_005867316.1"
                     /db_xref="eggNOG:bacteNOG07343"
                     /db_xref="eggNOG:bactNOG166725"
                     /db_xref="eggNOG:bctoNOG24068"
                     /db_xref="eggNOG:NOG117857"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1398..3032
                     /locus_tag="Alpa_03"
     CDS             1398..3032
                     /product="capsid protein VP1"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MKRPRRNAFNLSYESKLTLNMGELVPIMCMPVVPGDKFRVKTESLVRLAPLVAPMMHRVNVFTHYFFVPNRLVWNEWEDFITKGVDGEDMPMFPKIQINQDSHLVSSASLIKEYFGDSSLWDYLGLPTLSACGNKSYDVVNGVKVPSGFQVSALPFRAYQLIYNEYYRDQNLTEPIDFTLGSGTTVGGDQLMALMSLRRRAWEKDYFTSALPWLQRGPEVTVPVQGAGGSMDVVYERQSDSQKWVDSSGREFENGRAYDITMTRANDPNSALMVAVNGGTNNRAPELDPNGTLKVNVDEMGININDLRTSNALQRWFERNARGGSRYIEQILSHFGVRSSDARLQRPQFLGGGRMPISVSEVLQTSSTDETSPQANMAGHGISAGINNGFKHYFEEHGYIIGIMSITPRSGYQQGVPRDFTKFDNMDFYFPEFAHLSEQEIKNQELFVSEDAAYNNGTFGYTPRYAEYKYHPSEAHGDFRSNLSFWHLNRIFEDKPNLNTTFVECRPSNRVFATSETEDDKFWVQMYQDVKALRLMPKYGTPML"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_022322420.1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3081..3440
                     /locus_tag="Alpa_04"
     CDS             3081..3440
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MFVTAYNFSNLPSELIQEKVSDEVLVEPSESFTVRELIYRLAMGMPVSSGVRSGDYPDHDQDFDDVLPTEDPDFDLADYATLKNDLADRERQRKIDMEKAYKEKLEKEKTPDPAPDPAQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:INSD:WP_022322421.1"
                     /inference="similar to AA sequence:INSD:KDS61826.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4062..4253
                     /locus_tag="Alpa_05"
     CDS             4062..4253
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MRRFYFHVQFTDVEGVERFRSIQFSARDIIQAHNAGRKLVALLVCDHTVKEINAYYLESLKID"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 aaaaatctct ccgaagcaag cgctgctggt gcttggactg gtgcgaatca aaaggtactc 
       61 caatatgaat tagatcgtac cctgtttgac aataagatta agctttcgaa tgcagaatat 
      121 tctactgcta tggaagctct tcgtaaactt cgacaggata atgatattaa tgcgttccgg 
      181 tatagcatgg aacgtgtttt tggaaatagt tctgatgtaa aagatgtggc ttctgaattg 
      241 gtgaaacgta tgggtttatt attgatgcgt cccgatatca aggagcttga ccaaatgttt 
      301 aaccccaaat aattttttgt tatgagacgt agacgtagag gccgtagacg tggatttctc 
      361 ggtcgtagta gaagacgtag aattcgtggt tatcgtgtaa gtagaggagg tgttcgctta 
      421 tgaaaccagt ttggaaaatt atcattgccg ttttagaaac ggtcattgat gctgtaaagt 
      481 cgatctttga caaacccgat acccctgcgt tgaatggcta aatgccttca ccctatgtat 
      541 cttgccagtg tagaagcgaa agttccttgc ggttggtgtg taaactgtcg tcagaataag 
      601 cgtcaatctt gggtatatcg cttacaagcg gaagccaaag aatatccgct atcgttgttc 
      661 gtcactctta cttatgatga tgaacattta ccgatagaaa gaattggtag tgacctattt 
      721 caaacgaacg ttgccgtagt atccaaacgt gatgtacaat tgtttatgaa acggcttcga 
      781 aagaaatatg aggactataa aatgcgttat tttgtcactt ctgaatatgg tgcaaaaaat 
      841 ggccgccctc actatcatat gatcttattt ggcttccctt ttactggtaa aatggctggt 
      901 gacttactgg ccgaatgttg gcagaatggt tttgtacaag ctcacccttt gacaatcaaa 
      961 gagattgctt atgtctgtaa atacatgtac gaaaaaagta tgtgtcccga gattcttcgg 
     1021 gatgaaaaga agtacaaacc ttttatgctt tgttcccgaa atcccggtat tggctttgga 
     1081 tttatgaaag ctgatatcat cgaattttat cgtagacatc ctcgtgatta tgttcgtgcg 
     1141 tgggccggtc ataaaatggc tatgcctcgt tattatgctg ataagctcta tgatgatgat 
     1201 atgaaagcct ttttaaagga aatgcgtgaa gagtttttcc gacataaaat gttcaatgag 
     1261 tggattgatt attgtgctcg tgaaaatcct attcttaccg atctcatgca gcttgaacaa 
     1321 cgcgaagagt atgaaaaaag aatgaatgaa cgtttaagat gtaaaatgta atggcaaata 
     1381 tatttaactc gataagaatg aaacgtcctc gtcggaatgc tttcaactta tcatatgaat 
     1441 caaagttaac gttgaacatg ggcgaactcg tacctattat gtgtatgcct gttgttcccg 
     1501 gtgataaatt ccgtgtgaaa actgaatccc tcgtgcgttt ggctcccctt gtggctccta 
     1561 tgatgcaccg cgtgaatgtt tttactcact atttctttgt gccgaatcgt cttgtgtgga 
     1621 atgaatggga agacttcata actaaaggcg tagacggtga agatatgcca atgttcccga 
     1681 aaattcaaat taatcaagac tcgcacttag tttcttcggc ttcattaata aaagaatatt 
     1741 ttggcgattc ttctctctgg gattatcttg gattgcctac gctttctgct tgtggtaata 
     1801 aatcttatga tgttgttaac ggcgttaagg ttccttccgg tttccaagta tccgcgttgc 
     1861 ctttccgtgc ctatcagttg atctataatg agtattatcg tgatcagaat ttgaccgaac 
     1921 ctatcgattt caccttaggt agtggaacaa ccgttggtgg tgatcagctt atggcgctca 
     1981 tgtcgcttcg tcgtcgtgct tgggaaaaag actattttac ttctgccctt ccgtggttgc 
     2041 aacgtgggcc cgaagtcact gttcctgtgc aaggcgctgg cggttctatg gatgttgttt 
     2101 atgaacgtca gtctgatagt caaaaatggg tagattcttc tggtcgtgaa tttgagaatg 
     2161 gccgtgctta tgatattact atgaccaggg ctaacgatcc taattctgct ttaatggttg 
     2221 ccgtcaatgg tggtacaaat aaccgtgcgc ccgaactcga tccgaacggt acattaaaag 
     2281 tcaatgttga cgagatggga attaacatta acgaccttcg tacttcgaat gctttgcagc 
     2341 gttggttcga acgtaacgct cgtggtggtt ctcgttatat tgaacagatt ctgtcacact 
     2401 ttggtgttcg ttcatctgat gcgcgtttac agcgtccgca gttcctcggt ggcggtcgta 
     2461 tgcctatttc tgtgtcggaa gtattgcaaa catcctcgac tgatgaaacg tcaccgcagg 
     2521 caaatatggc cggacatggt atttctgctg gaatcaataa cggtttcaag cattattttg 
     2581 aagagcatgg atatattatc ggtatcatgt ctattactcc gcgttccggc tatcaacagg 
     2641 gtgttccgcg tgattttacg aagtttgata acatggattt ctatttcccg gaatttgccc 
     2701 atttgtcaga acaggaaatt aagaatcaag aattgtttgt atctgaagat gcagcttaca 
     2761 ataatggtac gtttggttat actccgcgtt atgctgaata taagtatcat ccttcggaag 
     2821 ctcatggcga tttccgtagt aatctttcat tttggcattt gaatcgtatt tttgaggaca 
     2881 aaccgaactt aaatactaca tttgttgagt gtagaccgag taaccgtgtt tttgctacat 
     2941 cagagaccga agacgataag ttttgggtac aaatgtacca agatgtcaaa gctcttcgtt 
     3001 tgatgcctaa atacggtact ccaatgcttt aatattatgc ttgaattttt tattgttgca 
     3061 ttttttagtt ttttgttcat atgtttgtta ccgcttataa ttttagtaat cttccttcgg 
     3121 aacttattca agaaaaagta agtgacgaag ttctggtaga accttccgaa agttttacag 
     3181 ttcgtgaact tatttaccgc ctcgcaatgg ggatgcctgt ttcttccggt gttcgatccg 
     3241 gtgattatcc cgatcatgac caagattttg atgatgtatt acctacagag gacccggatt 
     3301 tcgatttggc tgattacgct acattaaaga atgatctcgc cgatcgtgaa cgtcagcgca 
     3361 aaattgacat ggaaaaggcg tataaggaaa agttggaaaa ggaaaagact cccgaccctg 
     3421 ctcccgaccc tgctcagtaa tttgttttaa ctgtccttgt cccctacccg actggtatcc 
     3481 ccggccgggt ttaggcgttt gtacttgcac ctgcgctgat cgcgacaact cgcgaaagcg 
     3541 gacgtcgtct tggcatggtc tttctcgcga cccaatttaa ccaaaacctt tacgtgaaaa 
     3601 attcacgttt ttcaatcgat cgcgaagcga tacctatctg ccgaaggcgt ctgtaacgac 
     3661 aatcatagcg acggtgaaaa ttggcaacga tagttgcctg cgatcgcgag acggtaccaa 
     3721 tagggtagaa caaagcgtag cgacgtgata ccctgaggta cccgaacgcg atcgccctca 
     3781 atggagtaga cctgtttata cgcttataaa tagaataaat agaatataaa aagtgttaac 
     3841 gttataaatc aatactttac ccccttttaa agggggataa tagggggttg tatgtactcg 
     3901 tgcgcgcgta ataggtaact cgattaatta tgcgcgcact gacacctaaa cggattttaa 
     3961 caatccgttt ttttcagtgt ggaatatttt attttctttg ctgcataaat cacgctacca 
     4021 tagttctaaa agaatctcgg tagccttaaa ttaaaaggac aatgagacgg ttttattttc 
     4081 atgtacaatt tactgatgta gaaggtgttg aacgctttcg tagtatacaa ttctctgccc 
     4141 gtgatattat acaagcacat aatgctggta gaaaattggt agctcttctc gtttgtgatc 
     4201 ataccgtaaa ggagatcaat gcgtattatt tagaatcact taaaattgat tagtatgcct 
     4261 attggtgcta tagttggtgg tcttggctct cttgctggtt ctatgattgg tgcaaatgcc 
     4321 caacgacagg ctaatattca gaacatgcag ttggctaaat accagaacaa ctggcaaacc 
     4381 gccgagaatg aaaaggctta tgcccgtagt gtcgaaatgt ggaacatgca gaatcagtat 
     4441 aattcaccga ctgcgcaaat gtcccgtctt cggcaagctg gccttaatcc taatttggtt 
     4501 tatggtagtg gtgttactgg taatagcgct ggttcagctc cgcaatatca acccgcgaaa 
     4561 atccaacgtg ctacaatgga accctaccgc ggctggaatc ttggtttatc tgatgctgcg 
     4621 tctatgtata tggcaatgcg tcaaaataaa gctcaagttg aaaacatgga agctcaaaat 
     4681 aagctcatta aagaacaagc tcgaaccgaa ggtattcgtc aaggcaatat tgctatgtct 
     4741 accgctcgtt ccgggtttga tcttaacctt gctcgtgagc ttcgtaacgt atctattgat 
     4801 cgtgctatag cagag 
//
