bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-10_CDS_annotation_glimmer3.pl_2_1
Length=206
Score E
Sequences producing significant alignments: (Bits) Value
fch:102052261 FBLN1; fibulin 1 41.6
fpg:101922431 FBLN1; fibulin 1 41.6
sapi:SAPIS_v1c04090 ATP-dependent RNA helicase 38.9 0.54
sdi:SDIMI_v3c03460 ATP-dependent RNA helicase 38.1 1.00
plv:ERIC2_c26190 pbpF2; penicillin-binding protein 1F 38.1 1.1
stai:STAIW_v1c03950 ATP-dependent RNA helicase 36.6 3.4
eta:ETA_27760 biotin sulfoxide reductase 35.4 7.5
amt:Amet_4264 hypothetical protein 33.5 7.8
tcc:TCM_019385 hypothetical protein 35.4 8.6
> fch:102052261 FBLN1; fibulin 1
Length=1068
Score = 41.6 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query 60 YKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLRAYWQKYGCEVMGDNPIA 119
Y ++ +KE+ ++W+ R DWK N A QK+ ++ N I
Sbjct 118 YDQRMKFQKEQMRVWLLQQQR-------------DWK---NALAD-QKFADDLYDKNRIE 160
Query 120 WN--AMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIE 175
+ M+++RKEE+ RRAV +A K + L E+ L+ D M+++ E L++
Sbjct 161 LDQKTMEQQRKEEENRRAVCVATKDFNRTQAAELAEKKKLEKDQKMKDDMDEISGLLQ 218
> fpg:101922431 FBLN1; fibulin 1
Length=1068
Score = 41.6 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query 60 YKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLRAYWQKYGCEVMGDNPIA 119
Y ++ +KE+ ++W+ R DWK N A QK+ ++ N I
Sbjct 118 YDQRMKFQKEQMRVWLLQQQR-------------DWK---NALAD-QKFADDLYDKNRIE 160
Query 120 WN--AMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIE 175
+ M+++RKEE+ RRAV +A K + L E+ L+ D M+++ E L++
Sbjct 161 LDQKTMEQQRKEEENRRAVCVATKDFNRTQAAELAEKKKLEKDQKMKDDMDEISGLLQ 218
> sapi:SAPIS_v1c04090 ATP-dependent RNA helicase
Length=454
Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 24 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 81
G++D LD++ K N +N++++ + T NG K + KY IF E +K N+
Sbjct 161 GFIDELDFILSKMN-ENVSISLFSATISNGLKPFLSKYLSKAIFIESTEKKPSNKNIEHV 219
Query 82 LIW 84
L+W
Sbjct 220 LVW 222
> sdi:SDIMI_v3c03460 ATP-dependent RNA helicase
Length=455
Score = 38.1 bits (87), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 24 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 81
G+++ +D++ K N K++NV+ + T NG K + KY N IF E + N+
Sbjct 162 GFIEEVDFMLSKIN-KDVNVSLFSATINNGLKPFLQKYLSNSIFIENKDSNPTNKNIEHV 220
Query 82 LIW 84
LIW
Sbjct 221 LIW 223
> plv:ERIC2_c26190 pbpF2; penicillin-binding protein 1F
Length=810
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/133 (26%), Positives = 61/133 (46%), Gaps = 5/133 (4%)
Query 48 FRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLR--AYW 105
FR GT++++ +N +++ E +M++N + G +G K A + +DNL W
Sbjct 159 FRKGTEVSIALALEN-TYSKDEILEMYLNRIFLGQ-RSFGIKAAAKTYFGVDNLNDLQLW 216
Query 106 QKYGCEVMGDNPIAWNAMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQE 165
Q + P A+N + K K+RR V L + + T+ + P +
Sbjct 217 QMATLAALPKGPSAYNPISNPEKS-KERRGVVLKLMADQGYITQEECAQAAAVDYVPPKV 275
Query 166 EKQEWDKLIEKYI 178
EKQ+ D L + Y+
Sbjct 276 EKQDQDGLYQAYL 288
> stai:STAIW_v1c03950 ATP-dependent RNA helicase
Length=455
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (5%)
Query 24 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 81
G++D +D+L K N K++N++ + T N K + KY N IF E + N+
Sbjct 162 GFIDEVDFLISKIN-KDVNISLFSATINNSIKPFLRKYLSNSIFIENIDKNPTNKNIEHV 220
Query 82 LIW 84
LIW
Sbjct 221 LIW 223
> eta:ETA_27760 biotin sulfoxide reductase
Length=758
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 46/110 (42%), Gaps = 13/110 (12%)
Query 64 IFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTID--NLRAYWQKYGCEV-MGDNPIAW 120
+FTEK E WI +L Y + +A K ID +WQ+ E+ D P W
Sbjct 516 LFTEKRDEMAWIAHL-------YQQCAQAHSGKGIDFPAFETFWQQGHVEIPQPDKP--W 566
Query 121 NAMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEW 170
M + R++ Q + A + E FS +LP A P QEW
Sbjct 567 VFMADFRQDPLQ-HPINTASGKIELFSETIAGYQLPDFAPHPEWRPPQEW 615
> amt:Amet_4264 hypothetical protein
Length=98
Score = 33.5 bits (75), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/71 (31%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query 127 RKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIEKYIQSNYWLFE 186
+KE K AVA+ +TE ++ + L DFP +E+ EW K IE Y+ W
Sbjct 34 KKEGKYLYAVAILD------ATEKMVGSV-LVVDFPTREDLDEWLK-IEPYVTGEVWKII 85
Query 187 RVRRCATSELF 197
++ C F
Sbjct 86 EIKACKVPPFF 96
> tcc:TCM_019385 hypothetical protein
Length=696
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (47%), Gaps = 15/107 (14%)
Query 95 WKTIDNLRAYWQKYGCEVMGDNPIAWNAMKERRK--EEKQRRAVALAKKQAEKFSTENLI 152
W+ D + K+G + I ++ +ER++ E + RR + L ++ K
Sbjct 107 WEIHDCTNKDYLKFGLSTHLRSAIFYSMEEERKQAQESRIRRQMKLNRRIVSK------- 159
Query 153 EELPLQADFPMQEEKQEWDKLIEKYIQSNYWLFERVRRCATSELFDA 199
LP++ DF M E K + + Y+Q+NY L E + +T + ++
Sbjct 160 -ALPIEYDFCMAENKHQ-----KYYLQNNYRLCESLNLRSTEQFVES 200
Lambda K H a alpha
0.318 0.133 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 235643300514