bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-16_CDS_annotation_glimmer3.pl_2_5

Length=49
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  sbz:A464_plas0100  putative sensory transducer                      31.2    8.7


> sbz:A464_plas0100  putative sensory transducer
Length=259

 Score = 31.2 bits (69),  Expect = 8.7, Method: Composition-based stats.
 Identities = 14/30 (47%), Positives = 20/30 (67%), Gaps = 0/30 (0%)

Query  20   MCTIVYNEPIRKQKQSKFNAKNRTNNNVKR  49
            MCT+ YN  IRK+  S F  K++T+ + KR
Sbjct  195  MCTVSYNGKIRKENISAFLTKSKTDCSRKR  224



Lambda      K        H        a         alpha
   0.317    0.129    0.396    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 129834414891