bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_4

Length=635
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  aly:ARALYDRAFT_480073  hypothetical protein                         42.7    0.30
  tcc:TCM_034194  Transcriptional factor B3 family protein / auxi...  39.7    2.6


> aly:ARALYDRAFT_480073  hypothetical protein
Length=850

 Score = 42.7 bits (99),  Expect = 0.30, Method: Compositional matrix adjust.
 Identities = 32/98 (33%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query  290  IPFPLENLDLMRDNILKD---TGANS-EYQIRSTTISPYGDLAKRSASGKLSTTSPMFGL  345
            IPF   NL ++   +L+D   TG+ S  + +R  T   Y D++    SG ++  S +F L
Sbjct  139  IPFSFSNLSMLSALVLRDNELTGSLSLVWSLRKLT---YLDVSHNHFSGTMNPNSSLFEL  195

Query  346  ALKTYQSDIFNNWINTEWLDGEGGINEITAIDVSSGSL  383
               TY +  FNN+ ++      G +N++ ++DVSS SL
Sbjct  196  HHLTYLNLGFNNFTSSSLPYELGNLNKLESLDVSSSSL  233


> tcc:TCM_034194  Transcriptional factor B3 family protein / auxin-responsive 
factor AUX/IAA-related
Length=951

 Score = 39.7 bits (91),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 25/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (7%)

Query  213  PNNINR---EVNYNDNILIT---YTTNFKIESTTVKIKLQEKEVTKKLSDVINISSKNEG  266
            P+ IN    ++N N N+      + +  +  S+  K+KL+ +  T +LS + + S  NE 
Sbjct  508  PDPINSNLPKINANGNLHPPANKFESQTQARSSNEKLKLESEHSTDQLSQLTSTSECNEE  567

Query  267  VVKGTWNMPTAVWINISYKEINLIPFPLEN  296
             +      P+ +   +S+   N IPFPL+N
Sbjct  568  KLAANAASPSTILNQLSFPNQNQIPFPLQN  597



Lambda      K        H        a         alpha
   0.314    0.132    0.386    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1487960678397