bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-1_CDS_annotation_glimmer3.pl_2_8

Length=262
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  ncr:NCU06217  similar to ribosome biogenesis Nop4                   38.5    1.5
  lel:LELG_00112  hypothetical protein                                37.4    2.7
  dha:DEHA2F20790g  DEHA2F20790p                                      37.0    3.1
  sla:SERLADRAFT_409095  hypothetical protein                         36.6    5.2


> ncr:NCU06217  similar to ribosome biogenesis Nop4
Length=772

 Score = 38.5 bits (88),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (63%), Gaps = 3/56 (5%)

Query  102  LDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILMMAEA  157
            L+ K+K  +NNYL EG+RL+LD+  A++ DA  +G +   +   E  KR   +AEA
Sbjct  100  LEAKAK--LNNYLLEGKRLKLDIAEARHRDAKKTGPV-VSKVAEEKQKRAEAVAEA  152


> lel:LELG_00112  hypothetical protein
Length=660

 Score = 37.4 bits (85),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query  95   AQHIGALLDNKSK-RIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILM  153
            AQ I A LD  +K R++ N ++E    +L+ ++A++     +  LK +   +++++R+L 
Sbjct  474  AQRIEAQLDQVAKSRVVLNSINE----KLNTLSAKHDLGNTTRILKAKARHTQLSRRVLR  529

Query  154  MAEAKG-LQINNKAAEDTADGYIKALNAEYSASYDINSPFKYGEDSYVPASVLKSRMDAL  212
            +A     L++         +G  K  +   S   D +SP     D +   +VLK R + L
Sbjct  530  LATVLAILKLKGYPLLPEEEGIAKQFDLLSSKINDPSSPIGKLGDIFAKLTVLKERAEDL  589

Query  213  NSKWQFDK  220
            NS  QFD+
Sbjct  590  NS--QFDQ  595


> dha:DEHA2F20790g  DEHA2F20790p
Length=379

 Score = 37.0 bits (84),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 14/39 (36%), Positives = 25/39 (64%), Gaps = 0/39 (0%)

Query  55   KLGPEYKKWSQMTGLARAGLQFQTDKQNLRNMTWSGNLI  93
            KLGP ++ + +   ++   +QF +D QNL + TW+ N+I
Sbjct  336  KLGPGWELFERFGSMSHPNVQFDSDPQNLYHHTWTNNII  374


> sla:SERLADRAFT_409095  hypothetical protein
Length=367

 Score = 36.6 bits (83),  Expect = 5.2, Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 11/93 (12%)

Query  117  GQRLQLDLMAAQYYDAMASGHLK-----YQQAKSEITKRILMMAEAKG-LQINNKAAEDT  170
            G  LQL+ M A ++  ++ G +K     Y Q + +I K  L+ A A   L I +   ED 
Sbjct  80   GSDLQLNHMLASWH-CVSIGSIKLFKIYYIQFQLQILKDALLHACAINMLDIFDPLNEDI  138

Query  171  ADGYIKALNAEYSASYDINSPFKYGEDSYVPAS  203
            AD YI   NA++ A +    P+  G   Y P S
Sbjct  139  ADDYISEANAQWMAEH----PYSQGLVHYTPVS  167



Lambda      K        H        a         alpha
   0.313    0.127    0.364    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 396378569750