bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-30_CDS_annotation_glimmer3.pl_2_5
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
dja:HY57_15810 RND transporter MFP subunit 42.7 0.003
dji:CH75_12085 RND transporter MFP subunit 36.2 0.36
pkc:PKB_3029 RND family efflux transporter MFP subunit 35.8 0.52
pcp:JM49_18310 RND transporter MFP subunit 34.7 1.1
pch:EY04_11570 RND transporter MFP subunit 34.7 1.1
pprc:PFLCHA0_c26210 RND transporter, membrane fusion protein, ... 34.3 1.6
pfl:PFL_2557 RND family efflux transporter MFP subunit 33.1 3.9
pda:103715112 acyl-CoA-binding domain-containing protein 4-like 33.1 4.1
rsl:RPSI07_mp0392 agrB; rnd efflux pump, membrane fusion prote... 33.1 4.1
dme:Dmel_CG12151 Pdp; Pyruvate dehydrogenase phosphatase (EC:3... 33.1 4.2
cre:CHLREDRAFT_176946 hypothetical protein 33.1 4.2
meh:M301_0833 RND family efflux transporter MFP subunit 33.1 4.3
dse:Dsec_GM17460 GM17460 gene product from transcript GM17460-RA 33.1 4.5
btz:BTL_96 efflux transporter, RND family, MFP subunit 32.7 4.9
llo:LLO_0535 membrane-fusion protein involved in transport 32.7 5.4
ptm:GSPATT00031683001 hypothetical protein 32.7 5.7
mdo:100617359 TET3; tet methylcytosine dioxygenase 3 32.3
plp:Ple7327_0696 phosphoribosylaminoimidazole carboxylase cata... 32.0 8.1
sbi:SORBI_01g002200 SORBIDRAFT_01g002200, Sb01g002200; hypothe... 32.0 9.4
zma:100285710 acyl-CoA binding protein 32.0 9.6
> dja:HY57_15810 RND transporter MFP subunit
Length=389
Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (63%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLS-QTDKRYMNMLDTEEEVKQEA 68
L E D PEL ++ +A+ NLA+ + +L+ TDKR+ N+L + KQEA
Sbjct 110 LAEIDTPELDQQFEQAKANLARAQANARLAVLTDKRWKNLLTSNSVSKQEA 160
> dji:CH75_12085 RND transporter MFP subunit
Length=391
Score = 36.2 bits (82), Expect = 0.36, Method: Composition-based stats.
Identities = 19/52 (37%), Positives = 32/52 (62%), Gaps = 2/52 (4%)
Query 17 NRLLET-DNPELSEKLREARKNLAKEISRCKLSQ-TDKRYMNMLDTEEEVKQ 66
N+ L T D PEL ++ +A+ NLA+ + +L+ TDKR+ N+L + +Q
Sbjct 108 NQTLATIDTPELDQQYEQAKANLARAKANARLAALTDKRWKNLLASNSVSRQ 159
> pkc:PKB_3029 RND family efflux transporter MFP subunit
Length=380
Score = 35.8 bits (81), Expect = 0.52, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (61%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTD-KRYMNMLDTEEEVKQEA 68
L E D+P+L ++L++AR L + + L+QT R+ N+L + +QEA
Sbjct 99 LGEIDSPDLDQQLQQARARLQQAQANAHLAQTTAARWRNLLASHSVARQEA 149
> pcp:JM49_18310 RND transporter MFP subunit
Length=388
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (61%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTDK-RYMNMLDTEEEVKQEA 68
L E D+P+L ++L +A L +E + +L+QT R+ N++ + +QEA
Sbjct 106 LAEIDSPDLDQQLAQAHARLVQEQANARLAQTTAVRWQNLVASHSVSRQEA 156
> pch:EY04_11570 RND transporter MFP subunit
Length=388
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (61%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTDK-RYMNMLDTEEEVKQEA 68
L E D+P+L ++L +A L +E + +L+QT R+ N++ + +QEA
Sbjct 106 LAEIDSPDLDQQLAQAHARLVQEQANARLAQTTAVRWQNLVASHSVSRQEA 156
> pprc:PFLCHA0_c26210 RND transporter, membrane fusion protein,
putative
Length=388
Score = 34.3 bits (77), Expect = 1.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 32/51 (63%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTD-KRYMNMLDTEEEVKQEA 68
L D+P+L +++ +AR + ++ + +L+QT +R+ N+L + +QEA
Sbjct 106 LAHIDSPDLDQQVAQARARMTQQQANARLAQTTAERWQNLLASHSVSRQEA 156
> pfl:PFL_2557 RND family efflux transporter MFP subunit
Length=388
Score = 33.1 bits (74), Expect = 3.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (61%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTD-KRYMNMLDTEEEVKQEA 68
L D+P+L +++ +AR + ++ + +L+QT R+ N+L + +QEA
Sbjct 106 LAHIDSPDLDQQVAQARARMIQQQANARLAQTTAARWQNLLASHSVSRQEA 156
> pda:103715112 acyl-CoA-binding domain-containing protein 4-like
Length=675
Score = 33.1 bits (74), Expect = 4.1, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (4%)
Query 21 ETDNPELSEKLREARKNLAKEISRC-KLSQTDKRYMNMLDTEEEVKQEAVKTLRRSK 76
ET N EL+++L+ R LA E SRC KL L T E +++E V+ L+R K
Sbjct 587 ETSNAELTKELQSVRGQLAAEQSRCFKLEVDVAELCQKLQTLETLQKE-VELLQRQK 642
> rsl:RPSI07_mp0392 agrB; rnd efflux pump, membrane fusion protein,
czcb subfamily
Length=386
Score = 33.1 bits (74), Expect = 4.1, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (59%), Gaps = 1/51 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKL-SQTDKRYMNMLDTEEEVKQEA 68
L E + PEL E+L +AR LA S L + T +R+ ++L T+ +QEA
Sbjct 106 LGEIETPELDEQLAQARAELATARSNAALAASTARRWQSLLATDSVSRQEA 156
> dme:Dmel_CG12151 Pdp; Pyruvate dehydrogenase phosphatase (EC:3.1.3.16
3.1.3.43)
Length=475
Score = 33.1 bits (74), Expect = 4.2, Method: Composition-based stats.
Identities = 18/44 (41%), Positives = 27/44 (61%), Gaps = 0/44 (0%)
Query 14 RYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNM 57
+Y N+LLET ++S +L A L +EIS+ L+ D R MN+
Sbjct 159 KYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNV 202
> cre:CHLREDRAFT_176946 hypothetical protein
Length=1218
Score = 33.1 bits (74), Expect = 4.2, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (51%), Gaps = 3/59 (5%)
Query 14 RYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQEAVKTL 72
++ R L PEL E +REA +A+ + R K+ DK + D E + K+EA +
Sbjct 986 QFVQRYLLHKRPELYESVREA---VAERLPRLKVVVVDKNSLKDQDPERDAKREAAEAF 1041
> meh:M301_0833 RND family efflux transporter MFP subunit
Length=390
Score = 33.1 bits (74), Expect = 4.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 19 LLETDNPELSEKLREARKNLAKEISRCKLSQTD-KRYMNMLDTEEEVKQE 67
L E + P+L ++L +AR +LA + L+ T KR+ ML T+ KQE
Sbjct 109 LAEIETPDLDQQLLQARADLASTQANVGLAATTAKRWQEMLVTDSVSKQE 158
> dse:Dsec_GM17460 GM17460 gene product from transcript GM17460-RA
Length=475
Score = 33.1 bits (74), Expect = 4.5, Method: Composition-based stats.
Identities = 18/44 (41%), Positives = 27/44 (61%), Gaps = 0/44 (0%)
Query 14 RYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNM 57
+Y N+LLET ++S +L A L +EIS+ L+ D R MN+
Sbjct 159 KYVNQLLETPQRDVSSELVNAFLQLDEEISQEALASNDVRTMNV 202
> btz:BTL_96 efflux transporter, RND family, MFP subunit
Length=399
Score = 32.7 bits (73), Expect = 4.9, Method: Composition-based stats.
Identities = 17/46 (37%), Positives = 27/46 (59%), Gaps = 1/46 (2%)
Query 23 DNPELSEKLREARKNLAKEISRCKL-SQTDKRYMNMLDTEEEVKQE 67
D PEL E+L++AR +L ++ KL + T R+ ML + +QE
Sbjct 114 DTPELDEQLQQARADLQNSLANEKLAASTAARWTKMLQQDSVSQQE 159
> llo:LLO_0535 membrane-fusion protein involved in transport
Length=381
Score = 32.7 bits (73), Expect = 5.4, Method: Composition-based stats.
Identities = 17/46 (37%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query 23 DNPELSEKLREARKNLAKEISRCKLSQ-TDKRYMNMLDTEEEVKQE 67
+ PEL + R+AR +L I+ K++Q T KR+++++ TE +QE
Sbjct 111 ETPELDAQERQARADLKVAIANNKIAQITAKRWLHLVKTESVSQQE 156
> ptm:GSPATT00031683001 hypothetical protein
Length=1528
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (54%), Gaps = 2/65 (3%)
Query 13 PRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQEAVKTL 72
P + N+ + +N +S+++R+A+K + CK +Q + LD E +KQ ++ +
Sbjct 29 PSFMNQTVTINNQHISDQIRKAKKEAVSLHTSCKSTQHSPK--TSLDLSEFIKQTKIQQM 86
Query 73 RRSKL 77
+ KL
Sbjct 87 TQQKL 91
> mdo:100617359 TET3; tet methylcytosine dioxygenase 3
Length=1860
Score = 32.3 bits (72), Expect = 7.5, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (51%), Gaps = 2/51 (4%)
Query 13 PRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEE 63
PR F L DNPE E LR+ +NLA +++ + Y N + EEE
Sbjct 1047 PRKFR--LTGDNPEEEENLRKHFQNLATQVAPLYKKLAPQAYQNQVKDEEE 1095
> plp:Ple7327_0696 phosphoribosylaminoimidazole carboxylase catalytic
subunit PurE
Length=173
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query 18 RLLETDNPELSEKLREARKNLAKEI--SRCKLSQTD-KRYM 55
++L + NPEL EK+R+ R+NLA+ + + KL Q K+Y+
Sbjct 130 QILASHNPELLEKVRQYRQNLAQSVLEKQAKLEQLGYKQYL 170
> sbi:SORBI_01g002200 SORBIDRAFT_01g002200, Sb01g002200; hypothetical
protein
Length=659
Score = 32.0 bits (71), Expect = 9.4, Method: Composition-based stats.
Identities = 19/56 (34%), Positives = 29/56 (52%), Gaps = 0/56 (0%)
Query 21 ETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQEAVKTLRRSK 76
ET N EL+++L+ R LA E SRC + D + + ++ V+ LRR K
Sbjct 573 ETRNAELTKELQAVRGQLASEQSRCFKLEVDVAELRQKLQSMDALEKEVELLRRQK 628
> zma:100285710 acyl-CoA binding protein
Length=659
Score = 32.0 bits (71), Expect = 9.6, Method: Composition-based stats.
Identities = 19/56 (34%), Positives = 29/56 (52%), Gaps = 0/56 (0%)
Query 21 ETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQEAVKTLRRSK 76
ET N EL+++L+ R LA E SRC + D + + ++ V+ LRR K
Sbjct 573 ETRNAELTKELQAVRGQLASEQSRCFKLEVDVAELRQKLQSMDALEKEVELLRRQK 628
Lambda K H a alpha
0.313 0.129 0.346 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 128714468347