bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-33_CDS_annotation_glimmer3.pl_2_3
Length=588
Score E
Sequences producing significant alignments: (Bits) Value
fve:101314332 capsid protein VP1-like 199 5e-54
cca:CCA00722 hypothetical protein 40.0 0.26
stv:V470_09830 capsid protein 40.0 1.3
bpar:BN117_1888 tetraacyldisaccharide 4'-kinase 38.9 2.9
bbm:BN115_3027 tetraacyldisaccharide 4'-kinase 38.9 3.1
bbr:BB2008 lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130) 38.9 3.1
bpa:BPP2563 lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130) 38.9 3.1
tcc:TCM_010141 Zinc ion binding isoform 2 38.9
mxa:MXAN_0278 mercuric reductase, truncated 38.5 4.6
> fve:101314332 capsid protein VP1-like
Length=421
Score = 199 bits (505), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/183 (57%), Positives = 128/183 (70%), Gaps = 5/183 (3%)
Query 51 VLPGDTFKLRVNAFVRMNTLVAPFMDNVFMDTFFFFVPSRLVWDNWQRFCGEQKNPGDST 110
VLPGDTF + V F R+ T + P MDN+ +D+FFFFVP+RLVW+NW +F GEQ NP DS
Sbjct 77 VLPGDTFNVNVTMFGRLATPIFPVMDNLHLDSFFFFVPNRLVWNNWVKFMGEQDNPADSI 136
Query 111 DFLIP-SLSGTNTFANGSIFDYMGLPTGVPLNPTNT-PINALPFRAYNLIYNEWFRDENL 168
+ IP +S +A GS+ DY GLPT + +NT +ALP RAYNLIYN+WFRDENL
Sbjct 137 SYSIPQQVSPAGGYAVGSLQDYFGLPTAGQVGVSNTVSHSALPVRAYNLIYNQWFRDENL 196
Query 169 IDSIPVTTGDGPD--PVSNYTLRKRAKRHDYFTSALPWPQK-GPSVDVGLTGNAPIVGFG 225
+S+ V GDGPD P +NYTL +R KRHDYFTSALPWPQK G +V + L +API G
Sbjct 197 QNSVVVDKGDGPDTTPSTNYTLLRRGKRHDYFTSALPWPQKGGTAVSLPLGTSAPIAFSG 256
Query 226 QDG 228
G
Sbjct 257 ASG 259
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 103/157 (66%), Gaps = 6/157 (4%)
Query 302 LTALKGSDLSSFYHFGGGYLLP---ANPSQTPYADLSGVSAITINDLRQAFQIQKFYEKW 358
++ +G+ + + Y G G L A + YADLS +A TIN LRQ+FQIQK E+
Sbjct 265 ISTTQGNLIKNMYSTGSGTSLKIGSATVATGLYADLSAATAATINQLRQSFQIQKLLERD 324
Query 359 ARGGSRYTETLRVMFNVISPDARLQRPEYLGGTHSRVNVVPT---AQTSSTDSVSPQSNL 415
ARGG+RYTE +R F V SPDARLQRPEYLGG + +N+ P T + + +PQ NL
Sbjct 325 ARGGTRYTEIIRSHFGVASPDARLQRPEYLGGGSTPINIAPIAQTGGTGAQGTTTPQGNL 384
Query 416 SAFGVLGDSAHGFNKSFVEHGYVIGLCCLRADITYQQ 452
+AFG HGF++SFVEHG+VIGL +RAD+TYQQ
Sbjct 385 AAFGTYMAKGHGFSQSFVEHGHVIGLVSVRADLTYQQ 421
> cca:CCA00722 hypothetical protein
Length=117
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 18/21 (86%), Gaps = 0/21 (0%)
Query 568 FDLKTSRPMPVYSVPGLVDHF 588
F L+ +RPMPVYSV GL+DHF
Sbjct 97 FSLRCARPMPVYSVSGLIDHF 117
> stv:V470_09830 capsid protein
Length=427
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/142 (25%), Positives = 62/142 (44%), Gaps = 14/142 (10%)
Query 24 QRSVFDRSHDYKTTMDAGYLIPFFVDEVLPGDTFKLRVNAFVRMNTLVAPFMDNVFMDTF 83
+R D SH G LI V+ GD+F++ +R++ L + +D F
Sbjct 9 ERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMDAVGALRLSPLRRGLAIDSTVDIF 68
Query 84 FFFVPSRLVW-DNWQRFCGEQKNPGDSTDFLIPSLSGTNTFANGSIFDYMGLPTGVPLNP 142
F+VP R V+ + W +F + N +P+++ T + + ++G +NP
Sbjct 69 TFYVPHRHVYGEQWIKFMKDGVNATP-----LPTVNTTGYIDHAA---FLGT-----INP 115
Query 143 TNTPINALPFRAYNLIYNEWFR 164
I F+ Y IYN +F+
Sbjct 116 DTNKIPKHLFQGYLNIYNNYFK 137
> bpar:BN117_1888 tetraacyldisaccharide 4'-kinase
Length=347
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/176 (29%), Positives = 63/176 (36%), Gaps = 34/176 (19%)
Query 193 KRHDYFTSA-LPWPQKGPSVDVG-----LTGNAPIV--------------GFGQDGYQFN 232
KR+ Y T A W P V VG TG P+V G GY +
Sbjct 39 KRNAYLTGARAAWRAPVPVVVVGNIYVGGTGKTPVVIEVVRQLQARGWTPGVVSRGYGVD 98
Query 233 FTSDPADGQGPSSGWQLGAADTNNMGKLQAFFGNSVGAG-----NQARAWQNYGSPSPAW 287
+ P GQG QL AAD G A + GA ++ RA Q P
Sbjct 99 VGAAPRVGQG-----QLAAAD---YGDEPALIARATGAAIAVHPHRPRAVQALLRAHPG- 149
Query 288 TDVIQQQDDSSSVQLTALKGSDLSSFYHFGGGYLLPANPSQTPYADLSGVSAITIN 343
DV+ D + L + G G LLPA P + P L+ V AI N
Sbjct 150 VDVVVSDDGLQHLALARDVEIVVQDERGVGNGRLLPAGPLREPAQRLADVDAIVTN 205
> bbm:BN115_3027 tetraacyldisaccharide 4'-kinase
Length=347
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/176 (29%), Positives = 63/176 (36%), Gaps = 34/176 (19%)
Query 193 KRHDYFTSA-LPWPQKGPSVDVG-----LTGNAPIV--------------GFGQDGYQFN 232
KR+ Y T A W P V VG TG P+V G GY +
Sbjct 39 KRNAYLTGARAAWRAPVPVVVVGNIYVGGTGKTPVVIEVVRQLQARGWTPGVVSRGYGVD 98
Query 233 FTSDPADGQGPSSGWQLGAADTNNMGKLQAFFGNSVGAG-----NQARAWQNYGSPSPAW 287
+ P GQG QL AAD G A + GA ++ RA Q P
Sbjct 99 VGAAPRVGQG-----QLAAAD---YGDEPALIARATGAAIAVHPHRPRAVQALLRAHPG- 149
Query 288 TDVIQQQDDSSSVQLTALKGSDLSSFYHFGGGYLLPANPSQTPYADLSGVSAITIN 343
DV+ D + L + G G LLPA P + P L+ V AI N
Sbjct 150 VDVVVSDDGLQHLALARDVEIVVQDERGVGNGRLLPAGPLREPAQRLADVDAIVTN 205
> bbr:BB2008 lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Length=347
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/176 (29%), Positives = 63/176 (36%), Gaps = 34/176 (19%)
Query 193 KRHDYFTSA-LPWPQKGPSVDVG-----LTGNAPIV--------------GFGQDGYQFN 232
KR+ Y T A W P V VG TG P+V G GY +
Sbjct 39 KRNAYLTGARAAWRAPVPVVVVGNIYVGGTGKTPVVIEVVRQLQARGWTPGVVSRGYGVD 98
Query 233 FTSDPADGQGPSSGWQLGAADTNNMGKLQAFFGNSVGAG-----NQARAWQNYGSPSPAW 287
+ P GQG QL AAD G A + GA ++ RA Q P
Sbjct 99 VGAAPRVGQG-----QLAAAD---YGDEPALIARATGAAIAVHPHRPRAVQALLRAHPG- 149
Query 288 TDVIQQQDDSSSVQLTALKGSDLSSFYHFGGGYLLPANPSQTPYADLSGVSAITIN 343
DV+ D + L + G G LLPA P + P L+ V AI N
Sbjct 150 VDVVVSDDGLQHLALARDVEIVVQDERGVGNGRLLPAGPLREPAQRLADVDAIVTN 205
> bpa:BPP2563 lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Length=347
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/176 (29%), Positives = 63/176 (36%), Gaps = 34/176 (19%)
Query 193 KRHDYFTSA-LPWPQKGPSVDVG-----LTGNAPIV--------------GFGQDGYQFN 232
KR+ Y T A W P V VG TG P+V G GY +
Sbjct 39 KRNAYLTGARAAWRAPVPVVVVGNIYVGGTGKTPVVIEVVRQLQARGWTPGVVSRGYGVD 98
Query 233 FTSDPADGQGPSSGWQLGAADTNNMGKLQAFFGNSVGAG-----NQARAWQNYGSPSPAW 287
+ P GQG QL AAD G A + GA ++ RA Q P
Sbjct 99 VGAAPRVGQG-----QLAAAD---YGDEPALIARATGAAIAVHPHRPRAVQALLRAHPG- 149
Query 288 TDVIQQQDDSSSVQLTALKGSDLSSFYHFGGGYLLPANPSQTPYADLSGVSAITIN 343
DV+ D + L + G G LLPA P + P L+ V AI N
Sbjct 150 VDVVVSDDGLQHLALARDVEIVVQDERGVGNGRLLPAGPLREPAQRLADVDAIVTN 205
> tcc:TCM_010141 Zinc ion binding isoform 2
Length=437
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/75 (27%), Positives = 32/75 (43%), Gaps = 0/75 (0%)
Query 52 LPGDTFKLRVNAFVRMNTLVAPFMDNVFMDTFFFFVPSRLVWDNWQRFCGEQKNPGDSTD 111
LP R V + L+ P N F+ F F+ + + W + C + N G S++
Sbjct 345 LPIQLNPFRQPMVVEDSALILPCYSNCFLFAIFHFLKAYICWSYVKGECNQGSNGGGSSN 404
Query 112 FLIPSLSGTNTFANG 126
++P S FA G
Sbjct 405 LIVPCYSNCFLFAVG 419
> mxa:MXAN_0278 mercuric reductase, truncated
Length=463
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 49/134 (37%), Gaps = 31/134 (23%)
Query 213 VGLTGNAPIVGFGQDGYQFNFTSDPADGQGPSSGWQLGAADTN------NMGKLQAFFGN 266
VGL G P+ D +G GW DTN +MGK QA
Sbjct 283 VGLVGGKPV-----------EVDDQLRAKGVDGGWLYACGDTNGRNLLTHMGKYQARMVG 331
Query 267 SVGAGNQARAWQNYGSPSPAWTDVIQQQDDSSSVQLTALKGSDLSSFYHFGGGYLLPANP 326
V AG QARAW + + A V+ +SV LT K + LP
Sbjct 332 DVIAGKQARAWAD----AKATPQVVFTHPQVASVGLTEAKAREAG----------LPVRT 377
Query 327 SQTPYADLSGVSAI 340
+ D+SG S +
Sbjct 378 VEQQLQDVSGTSLV 391
Lambda K H a alpha
0.319 0.136 0.426 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1344946052866