bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-34_CDS_annotation_glimmer3.pl_2_3

Length=90
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  mrr:Moror_481  hypothetical protein                                 35.0    1.3
  pfj:MYCFIDRAFT_46458  hypothetical protein                          34.3    2.2
  osp:Odosp_2659  hypothetical protein                                33.1    5.8


> mrr:Moror_481  hypothetical protein
Length=426

 Score = 35.0 bits (79),  Expect = 1.3, Method: Composition-based stats.
 Identities = 25/72 (35%), Positives = 31/72 (43%), Gaps = 5/72 (7%)

Query  9    WAYGQDVVKVTCIKQGEDDKFVLTVGQYSVTP----IIFDTQEQAETFLETKFKLTNFDL  64
            W  GQ  V V    +GED K ++    YS  P     +FD    A   LE  F L N D 
Sbjct  310  WCEGQVRVHVDWAAKGEDGKPIVQSAAYSTVPNEAFKVFDLSRPAH-ILEIYFLLRNIDQ  368

Query  65   AVIGAMCQRLNE  76
               GA  +R+ E
Sbjct  369  WTTGAFKERVTE  380


> pfj:MYCFIDRAFT_46458  hypothetical protein
Length=437

 Score = 34.3 bits (77),  Expect = 2.2, Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 0/34 (0%)

Query  27   DKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLT  60
            DK VLTVG YS T + F +Q QA  ++ T  +LT
Sbjct  213  DKIVLTVGAYSDTLLDFKSQLQATAYVVTHVRLT  246


> osp:Odosp_2659  hypothetical protein
Length=531

 Score = 33.1 bits (74),  Expect = 5.8, Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 14/62 (23%)

Query  24   GEDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAVIGAMCQRLNELNEQNKL  83
            G  D FV+  GQY+VT I +D Q  AE             LA+ G +  R   + + NK+
Sbjct  219  GNGDMFVIDPGQYNVTTIGYDPQIGAEL------------LAITGKIYPR--SMQQDNKV  264

Query  84   YS  85
            YS
Sbjct  265  YS  266



Lambda      K        H        a         alpha
   0.315    0.131    0.371    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128026330890