bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-46_CDS_annotation_glimmer3.pl_2_2

Length=461
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  psn:Pedsa_1494  ribonucleoside-diphosphate reductase (EC:1.17.4.1)  38.1    4.8


> psn:Pedsa_1494  ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Length=854

 Score = 38.1 bits (87),  Expect = 4.8, Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 21/168 (13%)

Query  111  LKNIDDTRTEILAAKSTSAYILSNVRMPYGAATGTIELPNYNRTKVYRSSNAWFSQAGLA  170
            +  ID  + +++  +    + LS++R P G+                   N+  +  GL 
Sbjct  128  IMKIDQEQIQLMKRRGGVGHDLSHIR-PKGSPV----------------KNSALTSTGLV  170

Query  171  VKTYLSDRFNNWLNTEWIDGTTGGINAITAVDVTDGKLTMDALILQKKIFNMLNRVAITD  230
                  +R++N       DG  G +    +++  D +  +DA + Q K+      V ITD
Sbjct  171  P---FMERYSNSTREVAQDGRRGALMLSVSIEHPDAERFIDAKMEQGKVTGANVSVRITD  227

Query  231  GTYQAW-REATYGIRSATLPESPIFCGGMQSEIAFDEIVSNSATEEEP  277
               QA  +++ +  R     E PIF   ++++  +D+IV N+    EP
Sbjct  228  AFMQAVEKDSDFVQRYPIGAEKPIFSNKIKAKELWDKIVHNAWRSAEP  275



Lambda      K        H        a         alpha
   0.314    0.130    0.379    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 981216274224