bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_1
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
tet:TTHERM_00578490 DHHC zinc finger domain containing protein 37.7 0.74
cput:CONPUDRAFT_118217 hypothetical protein 36.6 1.7
tap:GZ22_07675 TetR family transcriptional regulator 35.8 1.8
oni:Osc7112_4833 CHAD domain containing protein 35.8 2.7
nve:NEMVE_v1g225819 hypothetical protein 34.7 6.1
> tet:TTHERM_00578490 DHHC zinc finger domain containing protein
Length=1007
Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/67 (27%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query 48 SLIFNQQRLENKLTASELREYIQRYTPNKSVYTAQLDDDTLLNTLKSRHIQSLSE-MRSW 106
SLIF ++ ++KL +L+EYI++Y PN + A+L + K + +++ +
Sbjct 784 SLIFEKEYYDSKLLMKQLKEYIEQYHPNNPLLQAELQYQEIHFLYKKKKFNEINDKINQA 843
Query 107 AEYCMEN 113
+++C++N
Sbjct 844 SQFCLQN 850
> cput:CONPUDRAFT_118217 hypothetical protein
Length=1351
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/155 (23%), Positives = 71/155 (46%), Gaps = 22/155 (14%)
Query 8 DHVFNGSFDILHTKVPVQDKLMQLSTVVNKDGSIVISNDISLIFNQQRLENKLTASELRE 67
DHV G + + +P + + + L ++ + ++SN++ N L ++E
Sbjct 997 DHVGRGLNEYIQHNLPNEMETLLLRPDISGHFASILSNNL----------NPLIERWVKE 1046
Query 68 YIQR-YTPNKSVYTAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDVEEKAR 126
I + + P S T+ + D +L ++S + + +W + N +SLI+D+E R
Sbjct 1047 AINKSFVPAYSQQTSAMHQD-ILREMRSEILNVKKDSMAWQTEALRNQESLIRDLEHSVR 1105
Query 127 LAAEE----------NAAAEGNAAAGASSSSASST 151
L +++ N +G+ A S+SS +ST
Sbjct 1106 LLSDQVKFLSLSSSANMGGQGHHARVPSNSSPAST 1140
> tap:GZ22_07675 TetR family transcriptional regulator
Length=183
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/63 (37%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 57 ENKLTASELREYIQRYTPNKS-VYTAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYD 115
E K A +++ R N+S +Y LD LL+ L +HIQ+L+EM WA C E ++
Sbjct 26 EKKFEAITIQDISDRANLNRSTIYLHYLDKYDLLDKLIDQHIQTLTEMDIWA--CEEEWE 83
Query 116 SLI 118
I
Sbjct 84 DAI 86
> oni:Osc7112_4833 CHAD domain containing protein
Length=338
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query 71 RYTPNKSVYTAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSL---IKDVEEKARL 127
RY PN S ++ D LLN LK RH ++L E+R+ E+ ++Y+SL I+D EK +
Sbjct 102 RYYPNLSADEQEVLDKALLNLLKQRH-RALKEVRAILEH--KSYESLKQSIEDWLEKPKF 158
Query 128 AAEEN 132
A E+
Sbjct 159 QAIEH 163
> nve:NEMVE_v1g225819 hypothetical protein
Length=265
Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/109 (26%), Positives = 51/109 (47%), Gaps = 9/109 (8%)
Query 12 NGSFDILHTKVPVQDKLMQLSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQR 71
NGS DI H V V D ++ + +++ + + + FN ++ A E+ +R
Sbjct 4 NGSIDIPH--VAVTDHQIRKRPLTDEEAAEITAFLGLRCFNNDSVDGVTQARAFLEFYER 61
Query 72 YTPNKSVYTAQLDDDTLLNTLKSRHIQSLSEMRSW--AEYCMENYDSLI 118
Y PNK L D + K++ +++ + R + A Y + NYD +I
Sbjct 62 YNPNKG-----LLDSAIGYLNKAQKLEAQKQNRDYIRAYYLLNNYDKVI 105
Lambda K H a alpha
0.309 0.123 0.326 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 128392897951