bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-51_CDS_annotation_glimmer3.pl_2_1
Length=379
Score E
Sequences producing significant alignments: (Bits) Value
fve:101314332 capsid protein VP1-like 43.5 0.051
vni:VIBNI_B0404 hypothetical protein 40.8 0.45
lgi:LOTGIDRAFT_152898 hypothetical protein 38.9 2.1
pkn:PKH_131040 Heat shock protein DnaJ, Pfj4-like protein 37.4 3.8
pcy:PCYB_132010 DnaJ domain containing protein 37.4 3.8
pvx:PVX_084600 DnaJ domain containing protein 37.0 5.4
oas:101117966 MMP17; matrix metallopeptidase 17 (membrane-inse... 37.4 5.5
> fve:101314332 capsid protein VP1-like
Length=421
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query 31 DYFNGVLPTPQFGSESV-VSLSQNADVY----TGFDKSQWQTLDGSAFPSGSVSSSNSDR 85
DYF LP PQ G +V + L +A + +G D T G+ + + S+ S
Sbjct 226 DYFTSALPWPQKGGTAVSLPLGTSAPIAFSGASGSDVGVISTTQGNLIKN--MYSTGSGT 283
Query 86 SLTANGKSIEHVHILPSGSITSSLSIAALRQATALQKYKEIQLANDPDFESQIEAHFGI- 144
SL G + + S ++ +I LRQ+ +QK E + I +HFG+
Sbjct 284 SLKI-GSATVATGLYADLSAATAATINQLRQSFQIQKLLERDARGGTRYTEIIRSHFGVA 342
Query 145 KPKHDMHKSRFIGGSSSMIDINPV 168
P + + ++GG S+ I+I P+
Sbjct 343 SPDARLQRPEYLGGGSTPINIAPI 366
> vni:VIBNI_B0404 hypothetical protein
Length=797
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/224 (22%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query 2 DLSSKFSSISVSDLGKSNMLD-------MRFSNLPLDYFNGVLPTPQFGSESVVSLSQNA 54
D +++++ I V+D G S + RF +DY G+ P SE + +S N
Sbjct 320 DTANQWNKIWVADAGDSLIPQAMTAPDGTRFGGSQIDYAGGITLNPYNSSE--LFISTNV 377
Query 55 DVYTGFDKSQWQTLDGSAFPSGSVSSSNSDRSLTANGKSIEHVHILPSGSITSSLSIAAL 114
+ TG D S+++ GS SG +LT++ + +P G+ SS +
Sbjct 378 NPTTGLDTSKFEIYKGSFNGSGFTW-----EALTSDSPDNNYRPFVPFGASNSSEQVVIW 432
Query 115 ---RQATALQKYKEIQLANDPDFESQIEAHFGIKPKHDMHKSRFIGGSSSMIDINPVVNQ 171
+ + + YK +Q + + ++ I K+ + +I G+ ++++P +
Sbjct 433 FTGKYESFVNGYKNLQSTGERYYFKGYDSK--IVGKYISRQGSYIAGTCRAVEVSPSNSN 490
Query 172 NLGAGQNQDNQAVTKAAPTGQGGASFKFTADTFGVVIGIYRCTP 215
G +QD + T + G S T +++ + YR TP
Sbjct 491 TTSYGGSQDQGSATFS------GNSITLTGNSWKAIDIDYRVTP 528
> lgi:LOTGIDRAFT_152898 hypothetical protein
Length=1107
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/92 (35%), Positives = 44/92 (48%), Gaps = 12/92 (13%)
Query 226 RTLLKTDASD--FVIPELDS--IGMQQTFQCELFAPTSQMTASAPDKRKYDMSRTFGYAP 281
R ++++ ASD F ELD I ++ + + TSQ A DK YD SR P
Sbjct 738 RNIIRSVASDTLFKDKELDELYILFKEEYLTSCYWRTSQQPAETADK--YDPSR-----P 790
Query 282 RYSEYKVSFDRYNGAFCDTLKSWVTGFNTHIF 313
Y YKV FD++ F +L W TG + I
Sbjct 791 YYDLYKVDFDQFKTMFL-SLAPWATGVHAGIL 821
> pkn:PKH_131040 Heat shock protein DnaJ, Pfj4-like protein
Length=245
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/107 (31%), Positives = 47/107 (44%), Gaps = 6/107 (6%)
Query 7 FSSISVSDLGKSNMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYTGFDKSQWQ 66
FS + S G S M SN P D F G FGS + + +T + S
Sbjct 117 FSEVMGSSFGDSRRGRMARSNDPFDNFFGSSFNISFGSSNFDTFMDGGSSFTSVETS--- 173
Query 67 TLDGSAFPSGSVSSSNSDRSLTANGK---SIEHVHILPSGSITSSLS 110
T +G F + V +S S + NGK IE V LP+G+I +++
Sbjct 174 TSNGGKFKNRFVKTSTSKTTSIINGKRVTRIETVKTLPNGTIERTVT 220
> pcy:PCYB_132010 DnaJ domain containing protein
Length=245
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/107 (30%), Positives = 46/107 (43%), Gaps = 6/107 (6%)
Query 7 FSSISVSDLGKSNMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYTGFDKSQWQ 66
FS + S G M SN P D F G FGS + + +T + S
Sbjct 117 FSEVMGSSFGDKRRGRMARSNDPFDNFFGSSFNISFGSSNFDNFMDGGSCFTSVETS--- 173
Query 67 TLDGSAFPSGSVSSSNSDRSLTANGK---SIEHVHILPSGSITSSLS 110
T +G F + V +S S + NGK IE V LP+G+I +++
Sbjct 174 TSNGGKFKNRFVKTSTSKTTSVVNGKRVTRIETVKTLPNGTIERTVT 220
> pvx:PVX_084600 DnaJ domain containing protein
Length=245
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/107 (30%), Positives = 46/107 (43%), Gaps = 6/107 (6%)
Query 7 FSSISVSDLGKSNMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYTGFDKSQWQ 66
FS + S G M SN P D F G FGS + + +T + S
Sbjct 117 FSEVMGSSFGDKRRGRMARSNDPFDSFFGSSFNISFGSSNFDNFMDGGSCFTSVETS--- 173
Query 67 TLDGSAFPSGSVSSSNSDRSLTANGK---SIEHVHILPSGSITSSLS 110
T +G F + V +S S + NGK IE V LP+G+I +++
Sbjct 174 TSNGGKFKNRFVKTSTSKTTSIVNGKRVTRIETVKTLPNGTIERTVT 220
> oas:101117966 MMP17; matrix metallopeptidase 17 (membrane-inserted)
Length=554
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (41%), Gaps = 30/176 (17%)
Query 115 RQATALQKYKEIQLA--------NDPDFESQIEA--HFGIKPKHDMHKSRF--IGGSSSM 162
RQA AL K+ + L+ + P + A H+ +K D+ F + GS++
Sbjct 120 RQAPALTKWNKRNLSWRVRTFPRDSPLGRDTVRALMHYALKVWSDITPLNFHEVAGSAAD 179
Query 163 IDINPVVNQNLGAGQNQDNQAVTKAAPTGQGGASFKFTADTFGVVIGIYRCTPVLDYSHV 222
I I P + G D++A T + G F FG IG+ SHV
Sbjct 180 IQIFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGL---------SHV 230
Query 223 GIDRTLLKT-------DASDFVIPELDSIGMQQTFQC-ELFAPTSQMTASAPDKRK 270
R++++ D + +P D + + Q + E +PT+Q+T P RK
Sbjct 231 AATRSIMQPYYQGPVGDPLRYGLPYEDRVRVWQLYGVRESVSPTAQLTI-GPAARK 285
Lambda K H a alpha
0.317 0.132 0.390 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 741147874124