bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-53_CDS_annotation_glimmer3.pl_2_1 Length=159 Score E Sequences producing significant alignments: (Bits) Value csv:101212579 uncharacterized LOC101212579 38.1 0.59 AciPR4_2106 NHL repeat containing protein 34.7 7.5 xma:102226907 calmodulin-regulated spectrin-associated protein... 34.7 7.5 > csv:101212579 uncharacterized LOC101212579 Length=810 Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 34/107 (32%), Positives = 52/107 (49%), Gaps = 14/107 (13%) Query 31 FSPSIQSVFTQLLKMSLSYVFS--TSPPSLFADAILIASNRLLTSLSPVSVIFNAIFPGC 88 FSPSI S+ L M L+Y+ S + PSL+ L+ +LL SL P F+A + Sbjct 283 FSPSITSLDKSRLMMELNYMLSYGAAVPSLY----LLQRFKLLGSLLP----FHAAYLDK 334 Query 89 FNISSRILSRVSSFCSFKIVFS-EFLYNVSSPGNCPTWIPCIVVYPA 134 I S +SS K+ F+ + L + + P NC W+ + + A Sbjct 335 QGIEK---SSLSSVMLMKLFFNLDKLVSCAHPSNCNIWVALLAFHLA 378 > tsa:AciPR4_2106 NHL repeat containing protein Length=1821 Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%) Query 32 SPSIQSVFTQLLKMSLSYVFSTSP-PSLFADAILIASNRLLTSLSPVSVIFNAIFPGCFN 90 +PS +V TQ++K S V + SP PSL D++L ++ +++ P ++ A G + Sbjct 682 APSTSAVLTQIVKQGPSVVLTASPNPSLVGDSVLFSAKVTTSTIQPSGLV--AFKDGATS 739 Query 91 ISSRIL--SRVSSFCSFKIVFSEFLYNVSSPGNCPT 124 I S L S V++F + +V S G+ T Sbjct 740 IGSGSLNGSGVATFATTALVAGSHSITASYVGDANT 775 > xma:102226907 calmodulin-regulated spectrin-associated protein 3-like Length=1579 Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 36/139 (26%), Positives = 59/139 (42%), Gaps = 20/139 (14%) Query 12 SIVIVPSSSGFNAVIFEIPF-------SPSIQSVFTQLLKMSLSYVFSTSPPSLFADAIL 64 S VI S+SG + IF+ PF SP +S + + LS V + P L +D + Sbjct 376 SPVIGNSNSGSPSFIFKQPFVPISSPVSPENKSWTKKQISRPLSAVTFSIPFGLDSDVDI 435 Query 65 IASNRLLTSLSPVSVIFNAIFPGCFNISSRILSRVSSFCSFKIVFS-----EFLYNVSSP 119 + N P+ +F ++ LS V++ + ++ FS L + S+P Sbjct 436 VMGN-------PIDSVFRSVSTDNLATGIPALSAVAAGMT-RVPFSPPEDLSHLVSASAP 487 Query 120 GNCPTWIPCIVVYPASELP 138 +W+P P ELP Sbjct 488 SQRSSWVPYAQTAPLGELP 506 Lambda K H a alpha 0.328 0.139 0.417 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125231514721