bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-6_CDS_annotation_glimmer3.pl_2_9
Length=82
Score E
Sequences producing significant alignments: (Bits) Value
crb:CARUB_v10013838mg hypothetical protein 35.4 0.79
bcom:BAUCODRAFT_43750 hypothetical protein 33.5 3.4
lgi:LOTGIDRAFT_152455 hypothetical protein 32.7 4.6
mze:101478053 protocadherin-16-like 33.1 5.4
eus:EUTSA_v10020845mg hypothetical protein 32.7 6.3
aly:ARALYDRAFT_896375 hypothetical protein 32.3 8.1
ttu:TERTU_0762 hypothetical protein 32.3 8.3
xma:102227496 protocadherin-16-like 32.3 8.6
mdm:103401355 uncharacterized LOC103401355 32.3 10.0
> crb:CARUB_v10013838mg hypothetical protein
Length=409
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (52%), Gaps = 1/64 (2%)
Query 5 EIKEGETIETKVRRITEEKTPITDSAPIVYTNR-TDGVIAGYNIRTDRFEIALSAMDKVN 63
EIKE E++ I E+ T + S P+VY NR TDG +A + + E S D++
Sbjct 90 EIKESGIDESETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIG 149
Query 64 KAKI 67
+ I
Sbjct 150 LSMI 153
> bcom:BAUCODRAFT_43750 hypothetical protein
Length=933
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (53%), Gaps = 0/55 (0%)
Query 27 TDSAPIVYTNRTDGVIAGYNIRTDRFEIALSAMDKVNKAKIATRNAKNKVRGIRY 81
T+S PI +T +G + + R + L+A D+ ++A++A A N++ Y
Sbjct 649 TESTPIAFTTSPEGNVQSADEELQRMQDRLAAFDRSDQARLAREEALNQLESYTY 703
> lgi:LOTGIDRAFT_152455 hypothetical protein
Length=218
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (36%), Positives = 26/53 (49%), Gaps = 2/53 (4%)
Query 25 PITDSAPIVYTNRTDGVIAG--YNIRTDRFEIALSAMDKVNKAKIATRNAKNK 75
PI I +TNR DG Y TD I+ S DK+N+A + + N +K
Sbjct 53 PIPAQDKITFTNRIDGFYKPEIYYTDTDSLYISSSNWDKLNEAGLVSENENSK 105
> mze:101478053 protocadherin-16-like
Length=3282
Score = 33.1 bits (74), Expect = 5.4, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query 4 VEIKEGETIETK---VRRITEEKTPITDSAPIVYTNRTDGVIAGYNIRTDR-FEIALSAM 59
VE+KEG I T+ VR + E AP+ Y R DG AG+ I D + SA+
Sbjct 1008 VELKEGTPISTRFLQVRALNRETPTSGHVAPLAYHLRPDGDAAGFGIAADSGWLFVKSAL 1067
Query 60 DK 61
D+
Sbjct 1068 DR 1069
> eus:EUTSA_v10020845mg hypothetical protein
Length=408
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (53%), Gaps = 1/59 (2%)
Query 10 ETIETKVRRITEEKTPITDSAPIVYTNR-TDGVIAGYNIRTDRFEIALSAMDKVNKAKI 67
E+ E++ I E+ T + S P+VY NR TDG +A + + E S D++ + I
Sbjct 94 ESHESETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCKSVKDRIGLSMI 152
> aly:ARALYDRAFT_896375 hypothetical protein
Length=405
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/64 (33%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query 5 EIKEGETIETKVRRITEEKTPITDSAPIVYTNR-TDGVIAGYNIRTDRFEIALSAMDKVN 63
+I E ET+ I E+ T + S P+VY NR TDG +A + + E S D++
Sbjct 91 DIAESETV-----NIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIG 145
Query 64 KAKI 67
+ I
Sbjct 146 LSMI 149
> ttu:TERTU_0762 hypothetical protein
Length=288
Score = 32.3 bits (72), Expect = 8.3, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 21/45 (47%), Gaps = 2/45 (4%)
Query 25 PITDSAPIVYTNRTDGVIAGYNIRTDRFEIALSAMDKVNKAKIAT 69
P PIVYT T G GYN + F++ S KV K I T
Sbjct 214 PEKTGKPIVYTGSTTG--PGYNEKASPFQVTWSVRPKVEKVNIET 256
> xma:102227496 protocadherin-16-like
Length=3269
Score = 32.3 bits (72), Expect = 8.6, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query 4 VEIKEGETIETK---VRRITEEKTPITDSAPIVYTNRTDGVIAGYNIRTD 50
VE+KEG I T+ VR ++ E + +P++Y R DG AG+ I D
Sbjct 1008 VELKEGTPINTRFLQVRAMSREVPGLGHLSPLMYHLRPDGDAAGFGIAAD 1057
> mdm:103401355 uncharacterized LOC103401355
Length=1620
Score = 32.3 bits (72), Expect = 10.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (15%)
Query 8 EGETIETKVRRITEEKTPITDSA-----PIVYTNRTDGVIAGYNIRT 49
EG + TK++ T+ K PI + A P++Y DG+I YNI T
Sbjct 142 EGGRVPTKIK--TDLKKPIVNLACHPRHPVLYVAYADGLIRAYNIHT 186
Lambda K H a alpha
0.314 0.131 0.348 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 126649600922