bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-8_CDS_annotation_glimmer3.pl_2_9
Length=239
Score E
Sequences producing significant alignments: (Bits) Value
fab:101817459 LRRCC1; leucine rich repeat and coiled-coil cent... 37.4 2.7
cdf:CD630_20760 hypothetical protein 36.6 3.9
obr:102708787 125 kDa kinesin-related protein-like 36.2 6.5
bom:102287083 uncharacterized LOC102287083 35.8 8.8
> fab:101817459 LRRCC1; leucine rich repeat and coiled-coil centrosomal
protein 1
Length=943
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/170 (28%), Positives = 81/170 (48%), Gaps = 17/170 (10%)
Query 31 KARTESDIE-LNNSTIYVNHELGQLNHAEAEVAAKKLQEIDVAMSEAR-ERISTMKAQQS 88
KAR ++DI+ L T + +EL Q + EAE K LQ ++ +S+ +R+ A+
Sbjct 482 KARLQADIQQLKGETERLTNELKQAKNKEAEYQ-KTLQALEETLSKMEMQRLQQRAAEMK 540
Query 89 QIDE---------NMVQLKFDRYLRSKE-----FELLCKRTYQDMKESNSRINLNAAEVQ 134
Q+ E VQL + KE ELL R + KE SR+ LN E Q
Sbjct 541 QVQEAELKSSANAREVQLLRISVRQQKEKVKHLHELLVLREQEQRKELGSRVALNGPEFQ 600
Query 135 DMMATQLARVMNLNASTYMQKKQGILASEQTMTELYKQTGIDISNQHAKF 184
D ++ ++A+ +A + ++ I S+Q EL ++ + ++ + +F
Sbjct 601 DALSKEVAKEEQRHAHHVRELQEKINISDQKYKELEQEFHLALTIEAKRF 650
> cdf:CD630_20760 hypothetical protein
Length=363
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/178 (26%), Positives = 77/178 (43%), Gaps = 19/178 (11%)
Query 67 QEIDVA---MSEARERISTMKAQQSQIDENMVQLKFDRYLRSKEFELLCKRTYQDMKESN 123
QEI++ MSE R+ I+TMK S++ + M +K D +E +L +DM E
Sbjct 130 QEINIMKEDMSEVRQEINTMKEDMSEVRQEMTVMKEDMSEVKQEINVL----KEDMSEVR 185
Query 124 SRINLNAAEVQDMMATQLARVMNLNASTYMQKKQGILASEQTMTELYKQTGI---DISNQ 180
IN+ ++ + Q VM + S KQ I ++ M+E+ ++ + D+S
Sbjct 186 QEINIMKEDMSE--VRQEMTVMKEDTSEV---KQEINVMKKDMSEVRQEITVMKEDVSEV 240
Query 181 HAKFNFDQAKNWDSTERFTNVATTWINSVSFAVGQFAGATTSLQKGGFLGKSMSPIGF 238
++ NF Q K + E + + VS A + G + KSM I
Sbjct 241 KSEVNFMQNKINNINEDMNGIK----DEVSIANEKLYGIEIKIDSLECEDKSMKEIQI 294
> obr:102708787 125 kDa kinesin-related protein-like
Length=623
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (52%), Gaps = 16/104 (15%)
Query 45 IYVNHELGQLNHAEAEVAAKKLQEIDVAMSEARERISTMK----AQQSQIDENMVQLKFD 100
IY+ HE L AE + K++ +++++ + R+ + K A+Q + D
Sbjct 437 IYIPHERFALEEAEKKTMKDKIESLELSIEDHRKEVDKFKRLYLAEQEH--------RLD 488
Query 101 RYLRSKEFEL---LCKRTYQDMKESNSRINLNAAEVQDMMATQL 141
R+KE ++ CK+ + D++E++SR N++ E +D + + L
Sbjct 489 LESRNKELKMNIESCKKEFLDLEEAHSRANISLKE-KDFIISNL 531
> bom:102287083 uncharacterized LOC102287083
Length=1625
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 37/163 (23%), Positives = 78/163 (48%), Gaps = 9/163 (6%)
Query 1 LKAAQARLANSESKKTDTEESLLTADYLLRKARTESDIELNNSTIYVNHELGQLNHAEAE 60
L+ A + A + ++ D + LLT L++ E+ ++ E +L +
Sbjct 85 LERAASTSARNYEREVDRNQELLTRIRQLQEREAEAQEKMKEQL-----ERHRLCQQSLD 139
Query 61 VAAKKLQEIDVAMSEARERISTMKAQQSQIDENMVQLKFD-RYLRSKEFELLCKRTYQDM 119
A +KL+E + ++EA E I+T+K + S + +++ + + L S++ EL + Q
Sbjct 140 AAGRKLREKEDGLAEAGETITTLKGRLSDLQWSVMNQEMQVKRLESEKQELKEQLDLQHQ 199
Query 120 K--ESNSRINLNAAEVQDMMATQLARVMNLNASTYMQKKQGIL 160
K E+N ++ A Q++ A Q R+ +L +Q++ +
Sbjct 200 KWQEANQKVQELQAS-QEVRADQEQRIKDLEQKLSLQEQDAAI 241
Lambda K H a alpha
0.312 0.123 0.328 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 332748986752