bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-10_CDS_annotation_glimmer3.pl_2_1
Length=49
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_gi|12085137|ref|NP_073539.1|_hypothetical_protein_phiMH2... 22.3 0.14
Alpavirinae_Human_feces_B_021_Microviridae_AG0372_putative.VP4 20.0 1.3
Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1 20.0 1.6
Gokush_Human_gut_33_023_Microviridae_AG0366_putative.VP1 20.0 1.7
Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 19.6 2.0
Alpavirinae_Human_feces_B_020_Microviridae_AG0349_putative.VP4 19.2 2.5
Alpavirinae_Human_feces_A_047_Microviridae_AG0312_putative.VP4 19.2 2.9
Alpavirinae_Human_feces_C_029_Microviridae_AG0108_putative.VP4 19.2 3.1
Alpavirinae_Human_feces_A_048_Microviridae_AG086_putative.VP4 19.2 3.3
Gokush_Bourget_224_Microviridae_AG0245_putative.VP1 18.9 4.8
> Gokush_gi|12085137|ref|NP_073539.1|_hypothetical_protein_phiMH2Kp03_[Bdellovibrio_phage_phiMH2K]
Length=64
Score = 22.3 bits (46), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 6/42 (14%), Positives = 22/42 (52%), Gaps = 0/42 (0%)
Query 8 ELGEKKTKEVEIYVIEGTFAEAYKAAKLFMEKNYYIKSIKEA 49
+LG+ + + + G F + + ++ K+ +++S++ +
Sbjct 3 QLGKIQRSTRQPIGLNGLFDPNNHSTRWWLRKHVHLRSLRNS 44
> Alpavirinae_Human_feces_B_021_Microviridae_AG0372_putative.VP4
Length=332
Score = 20.0 bits (40), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 1 MRTKYIIELGEKKTKEVEIYVI 22
+R +I ELG +KT+ + ++ I
Sbjct 113 IRHWFITELGHEKTERLHLHGI 134
> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651
Score = 20.0 bits (40), Expect = 1.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 24 GTFAEAYKAAKLFMEKNYYIK 44
G FA A + + +NY IK
Sbjct 574 GNFAAGMSEAFMVLNRNYEIK 594
> Gokush_Human_gut_33_023_Microviridae_AG0366_putative.VP1
Length=533
Score = 20.0 bits (40), Expect = 1.7, Method: Composition-based stats.
Identities = 14/43 (33%), Positives = 20/43 (47%), Gaps = 3/43 (7%)
Query 6 IIELGEKKTKEVEIYVIEGTFA--EAYKAAKLFMEKNYYIKSI 46
+ LGE+ EIY +GT A E + + + E YY I
Sbjct 416 LAHLGEQTILNKEIYA-QGTAADDEVFGYQERYAEYRYYPSQI 457
> Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1
Length=530
Score = 19.6 bits (39), Expect = 2.0, Method: Composition-based stats.
Identities = 10/24 (42%), Positives = 15/24 (63%), Gaps = 3/24 (13%)
Query 25 TFAEAYKAAKLFMEKNYYIKSIKE 48
T A+ KAAK+F +YY ++ E
Sbjct 189 TLAKPLKAAKVF---DYYTGALPE 209
> Alpavirinae_Human_feces_B_020_Microviridae_AG0349_putative.VP4
Length=332
Score = 19.2 bits (38), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 7/18 (39%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 5 YIIELGEKKTKEVEIYVI 22
+I ELG +KT+ + ++ I
Sbjct 117 FITELGHEKTERLHLHGI 134
> Alpavirinae_Human_feces_A_047_Microviridae_AG0312_putative.VP4
Length=332
Score = 19.2 bits (38), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 7/18 (39%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 5 YIIELGEKKTKEVEIYVI 22
+I ELG +KT+ + ++ I
Sbjct 117 FITELGHEKTERLHLHGI 134
> Alpavirinae_Human_feces_C_029_Microviridae_AG0108_putative.VP4
Length=291
Score = 19.2 bits (38), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 7/18 (39%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 5 YIIELGEKKTKEVEIYVI 22
+I ELG +KT+ + ++ I
Sbjct 76 FITELGHEKTERLHLHGI 93
> Alpavirinae_Human_feces_A_048_Microviridae_AG086_putative.VP4
Length=332
Score = 19.2 bits (38), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 7/18 (39%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 5 YIIELGEKKTKEVEIYVI 22
+I ELG +KT+ + ++ I
Sbjct 117 FITELGHEKTERLHLHGI 134
> Gokush_Bourget_224_Microviridae_AG0245_putative.VP1
Length=536
Score = 18.9 bits (37), Expect = 4.8, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 10/18 (56%), Gaps = 0/18 (0%)
Query 9 LGEKKTKEVEIYVIEGTF 26
LGE+ EIYV G+
Sbjct 419 LGEQSILNKEIYVTGGSL 436
Lambda K H a alpha
0.315 0.132 0.344 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3639357