bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-12_CDS_annotation_glimmer3.pl_2_2
Length=76
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.... 63.2 3e-16
Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p... 61.6 9e-16
Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.... 55.5 2e-13
Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.... 51.2 8e-12
Gokush_Bourget_504_Microviridae_AG0256_putative.VP1 19.6 5.8
Gokush_Bourget_248_Microviridae_AG0251_putative.VP1 19.6 5.8
> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68
Score = 63.2 bits (152), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
Query 9 MKITGNQWIEivraistmiiaiittLCTQACTMSLSVSKnnsnstqkteqtstssVDSTH 68
MKITG QW+EI+RAIST IIAIITTLC Q+CTMSLSV+KNN+N++QKTEQT+TSSVDSTH
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTTTSSVDSTH 60
Query 69 ININPKNY 76
ININPKNY
Sbjct 61 ININPKNY 68
> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68
Score = 61.6 bits (148), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/68 (84%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
Query 9 MKITGNQWIEivraistmiiaiittLCTQACTMSLSVSKnnsnstqkteqtstssVDSTH 68
MKITGNQW+EI+RAIST IIAIITTLC Q+CTMSLSV+KNN+N++QKTEQTSTSS+DST
Sbjct 1 MKITGNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTSTSSIDSTK 60
Query 69 ININPKNY 76
ININPKNY
Sbjct 61 ININPKNY 68
> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67
Score = 55.5 bits (132), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/66 (86%), Positives = 61/66 (92%), Gaps = 0/66 (0%)
Query 9 MKITGNQWIEivraistmiiaiittLCTQACTMSLSVSKnnsnstqkteqtstssVDSTH 68
MKITG QW+EI+RAIST IIAIITTLC Q+CTMSLSV+KNN NSTQKTEQTSTSSVDST
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTK 60
Query 69 ININPK 74
ININPK
Sbjct 61 ININPK 66
> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65
Score = 51.2 bits (121), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (94%), Gaps = 0/64 (0%)
Query 9 MKITGNQWIEivraistmiiaiittLCTQACTMSLSVSKnnsnstqkteqtstssVDSTH 68
MKIT NQW+EI+RAIST IIAIITTLC Q+CTMSLSVSKNNSNSTQKTEQTSTSSVDST
Sbjct 1 MKITSNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTK 60
Query 69 ININ 72
ININ
Sbjct 61 ININ 64
> Gokush_Bourget_504_Microviridae_AG0256_putative.VP1
Length=536
Score = 19.6 bits (39), Expect = 5.8, Method: Composition-based stats.
Identities = 7/8 (88%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
Query 66 STHININP 73
ST+ININP
Sbjct 334 STNININP 341
> Gokush_Bourget_248_Microviridae_AG0251_putative.VP1
Length=546
Score = 19.6 bits (39), Expect = 5.8, Method: Composition-based stats.
Identities = 7/8 (88%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
Query 66 STHININP 73
ST+ININP
Sbjct 344 STNININP 351
Lambda K H a alpha
0.315 0.124 0.374 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629730