bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-13_CDS_annotation_glimmer3.pl_2_6
Length=70
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 45.8 6e-10
Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.... 43.9 3e-09
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 43.5 5e-09
Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.p... 40.4 5e-08
Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.... 38.9 2e-07
Gokush_Bourget_164_Microviridae_AG048_putative.VP3 23.9 0.12
Gokush_Bourget_052_Microviridae_AG0191_putative.VP2 21.2 1.2
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 45.8 bits (107), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (6%)
Query 1 MAATKFSVVKENKNTSELLIINYAGEWTYKTALAIAKEANREFNEEGWRIVCVVETKKLY 60
MAATKF+ + + N +++ G TYK A AK N + E ++VCVVE+ KLY
Sbjct 1 MAATKFTAIYAD-NNGKIIEREIPGMNTYKIAEKFAKMLN---DPEETKLVCVVESWKLY 56
Query 61 PNENEKTKKD 70
P ENEKT+K+
Sbjct 57 PKENEKTEKN 66
> Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.protein
Length=73
Score = 43.9 bits (102), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/69 (45%), Positives = 41/69 (59%), Gaps = 4/69 (6%)
Query 1 MAATKFSVVKENKNTSELLIINYAGEWTYKTALAIAKEANREFNEEGWRIVCVVETKKLY 60
MAATKF+ + N N +++ G TYK A A N + + ++VCVVE+ KLY
Sbjct 1 MAATKFTAIYVN-NEGKIIEREIPGMNTYKIAEKFAMMLN---DPKETKLVCVVESWKLY 56
Query 61 PNENEKTKK 69
P ENEKTKK
Sbjct 57 PKENEKTKK 65
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 43.5 bits (101), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 42/70 (60%), Gaps = 4/70 (6%)
Query 1 MAATKFSVVKENKNTSELLIINYAGEWTYKTALAIAKEANREFNEEGWRIVCVVETKKLY 60
MAATKF+ + N N +++ G TYK A A N + E ++VCV+E+ KLY
Sbjct 1 MAATKFTAIYVN-NEGKIIEREIPGMNTYKIAEKFAIMLN---DPEETKLVCVIESWKLY 56
Query 61 PNENEKTKKD 70
P ENEKT+K+
Sbjct 57 PKENEKTEKN 66
> Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.protein
Length=73
Score = 40.4 bits (93), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (59%), Gaps = 4/70 (6%)
Query 1 MAATKFSVVKENKNTSELLIINYAGEWTYKTALAIAKEANREFNEEGWRIVCVVETKKLY 60
MAATKF+ + N N +++ G +YK A A N + E ++VCV+ET K+Y
Sbjct 1 MAATKFTAIYIN-NEGKIIKREIPGMNSYKIAEKFAMMLN---DPEETKLVCVIETWKMY 56
Query 61 PNENEKTKKD 70
PN EKT+K+
Sbjct 57 PNNYEKTEKE 66
> Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.protein
Length=55
Score = 38.9 bits (89), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (63%), Gaps = 3/48 (6%)
Query 24 AGEWTYKTALAIAKEANREFNEEGWRIVCVVETKKLYPNEN-EKTKKD 70
G+ TYK A+ +AK +E EG IV VVE+ KLYPNE EKT D
Sbjct 5 PGKHTYKVAVTVAKALMQEV--EGEEIVAVVESWKLYPNETKEKTNND 50
> Gokush_Bourget_164_Microviridae_AG048_putative.VP3
Length=132
Score = 23.9 bits (50), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 7/23 (30%), Positives = 16/23 (70%), Gaps = 0/23 (0%)
Query 21 INYAGEWTYKTALAIAKEANREF 43
I+Y G + +++A+ + K+A+ F
Sbjct 60 IDYEGVFDFQSAMNVVKQADENF 82
> Gokush_Bourget_052_Microviridae_AG0191_putative.VP2
Length=253
Score = 21.2 bits (43), Expect = 1.2, Method: Composition-based stats.
Identities = 8/26 (31%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 20 IINYAGEWTYKTALAIAKEANREFNE 45
++ Y+G+ +A A + NR+F E
Sbjct 29 LLGYSGQQDTNSANAAQAQHNRDFQE 54
Lambda K H a alpha
0.309 0.125 0.356 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3733230