bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-19_CDS_annotation_glimmer3.pl_2_1
Length=326
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.... 422 4e-149
Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypotheti... 41.2 5e-06
Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2 39.3 2e-05
Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2 39.3 2e-05
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 37.0 1e-04
Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.p... 36.6 2e-04
Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.p... 33.5 0.002
Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.... 32.7 0.003
Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.... 32.0 0.004
Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.p... 32.3 0.005
> Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.protein.HMPREF9141.0987
Length=335
Score = 422 bits (1084), Expect = 4e-149, Method: Compositional matrix adjust.
Identities = 221/289 (76%), Positives = 249/289 (86%), Gaps = 10/289 (3%)
Query 1 MSIlaglgaaaaSFALKEGHNAIAQSRNEKNMALEHDYWKRRVNYLEELNKPSRQVAKWR 60
MSILAGLGAAAASFA+KEGHNAIAQSRNEKNMALEHDYWKRRVN LEE+NKPSRQVAKWR
Sbjct 1 MSILAGLGAAAASFAMKEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWR 60
Query 61 SAGIAPQAVFGNSPGGAGIATDASAPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV 120
SAGIAPQAVFGNSPGGAGIATDAS+PNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV
Sbjct 61 SAGIAPQAVFGNSPGGAGIATDASSPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV 120
Query 121 NKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQRANNEADM 180
+KLNAEA KLRGDTKDP VTKD Q+LEFDWN+VKKQREQVQL VDEI+KEF+RA NEAD+
Sbjct 121 DKLNAEAGKLRGDTKDPKVTKDLQQLEFDWNIVKKQREQVQLDVDEIDKEFRRAVNEADL 180
Query 181 QIKRGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDLIESQISATQAQTD-------FTK 233
QIKRG+YSETL+KIDKLIADK+VSEEM++NLQKQRDLI +QI +T+AQTD +K
Sbjct 181 QIKRGIYSETLSKIDKLIADKEVSEEMRRNLQKQRDLIVAQIDSTKAQTDLSKAQTGLSK 240
Query 234 AQTMTENMTRDDRIREIKSRINNLVSSTNLND---ENARSALYSRLADV 279
AQT TE+ R R+R ++ ++S LND + + + RL D+
Sbjct 241 AQTKTEDDLRKGRVRLTGAQTTEVLSMAGLNDVRRDREKYETFLRLLDI 289
> Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypothetical.protein.BACEGG.02723
Length=275
Score = 41.2 bits (95), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (55%), Gaps = 11/77 (14%)
Query 18 EGHNAIAQS---RNEKNMALEHDYWKRRVNYLEELNKPSRQVAKWRSAGIAPQAVFGNSP 74
+G N ++Q+ R ++N A++ +W N E N P Q+ +++ AG+ P ++G
Sbjct 18 QGFNTLSQAYGNRQQRNFAVK--FW----NMQNEYNLPINQMQRFKDAGLNPHLIYGQ-- 69
Query 75 GGAGIATDASAPNSQTP 91
G AG A+ S P+ Q P
Sbjct 70 GNAGNASPISLPDRQDP 86
> Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2
Length=364
Score = 39.3 bits (90), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/216 (30%), Positives = 100/216 (46%), Gaps = 36/216 (17%)
Query 62 AGIAPQAVFGNSPGGAGIATDASAPNSQTPM-----GSSDFNFVTTIAERQRMKN---EK 113
+G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 99 SGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADADI 148
Query 114 AIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQR 173
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF +
Sbjct 149 ALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFAQ 201
Query 174 ANNEADMQIKRGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQI 222
A EAD+ ++ L E +++ +A ++ + + RDL ESQ
Sbjct 202 AFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQT 261
Query 223 SATQAQTDFTKAQTMTENMTRDDRIREIKSRINNLV 258
SATQAQT T+AQT TEN R R +++IN +
Sbjct 262 SATQAQTGLTQAQTETENQLRKLRKALTQNQINEIT 297
> Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2
Length=364
Score = 39.3 bits (90), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/216 (30%), Positives = 100/216 (46%), Gaps = 36/216 (17%)
Query 62 AGIAPQAVFGNSPGGAGIATDASAPNSQTPM-----GSSDFNFVTTIAERQRMKN---EK 113
+G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 99 SGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADADI 148
Query 114 AIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQR 173
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF +
Sbjct 149 ALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFAQ 201
Query 174 ANNEADMQIKRGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQI 222
A EAD+ ++ L E +++ +A ++ + + RDL ESQ
Sbjct 202 AFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQT 261
Query 223 SATQAQTDFTKAQTMTENMTRDDRIREIKSRINNLV 258
SATQAQT T+AQT TEN R R +++IN +
Sbjct 262 SATQAQTGLTQAQTETENQLRKLRKALTQNQINEIT 297
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 37.0 bits (84), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (49%), Gaps = 9/80 (11%)
Query 39 WKRRVNYLEELNKPSRQVAKWRSAGIAPQAVFGNSPGGAGI-ATDASAPNSQTP----MG 93
W ++ Y N PS+Q+ +++ AG+ P ++G A I +TD P+ P G
Sbjct 50 WDKQNKY----NSPSQQMQRYKEAGLNPNLIYGQMSNSAAIRSTDMKQPDFVAPKLQNTG 105
Query 94 SSDFNFVTTIAERQRMKNEK 113
N++ + Q++ N+K
Sbjct 106 QVMNNYIDLKLKEQQLSNDK 125
> Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.protein.BACEGG.02723
Length=383
Score = 36.6 bits (83), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 44/252 (17%)
Query 42 RVNYLEE--LNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIA---TDASAPNSQTPMGSSD 96
R N +E N PS +++ + AG+ P ++GN G AG+ +AP S P
Sbjct 70 RANLADERSYNSPSTVMSRLKDAGLNPDLIYGN--GAAGLVDSNVAGTAPVSSVPPADVA 127
Query 97 FNFVTTIAERQRMKNEKAIADATVNKLNAEAEKLRGDT--KDPNVTKDSQRLEFDWNLVK 154
+ T + + A A K AE + ++ DT K+ VT L D N VK
Sbjct 128 GPIMATPTAMESLFQGAAYA-----KTLAETKNIKADTSKKEGEVTS----LNID-NFVK 177
Query 155 KQREQVQLAVDEINKEFQRANNEADMQIKRGLYSETLAKIDKLIADKDVSEEMKQNLQKQ 214
+ + + + +A E + K L SE D++E +
Sbjct 178 AASSDNAIKMSGLEVQLTKAQAEYTEKQKSRLISEI----------NDINEHV------- 220
Query 215 RDLIESQISAT-------QAQTDFTKAQTMTENMTRDDRIREIKSRINNLVSSTNLNDEN 267
+L+++QIS T A T T+ + N D E R+ + NL++
Sbjct 221 -NLLKAQISETWSRTANLDASTVATRTAAILNNRRFDLECEEFARRVRETDAKVNLSEAE 279
Query 268 ARSALYSRLADV 279
A+S L + A V
Sbjct 280 AKSILVTMYAKV 291
> Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.protein.BACPLE
Length=422
Score = 33.5 bits (75), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (27%), Positives = 45/113 (40%), Gaps = 14/113 (12%)
Query 22 AIAQSRNEKNMALEHDYWKRRVNYLEELNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIA- 80
A+ Q L HD K+ +Y N PS + + AG+ P AV G S G G++
Sbjct 58 ALEQMSKSAEYQLAHD--KQMFDYQNAYNDPSAVLERNLVAGLNPAAVLGQS--GVGVSA 113
Query 81 ----TDASAPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATVNKLNAEAEK 129
+ AP+ P+ S + +A N A AD + E E+
Sbjct 114 TIPTSSGGAPSGHGPVASGSGGGLAALA-----GNPSAYADVQLKDAQQERER 161
> Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.BACEGG.02723
Length=407
Score = 32.7 bits (73), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (31%), Positives = 39/78 (50%), Gaps = 7/78 (9%)
Query 50 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGIATDASAPNSQTPMGSSDFNFVTTIAERQRM 109
N P +QVA+ R AG+ P + G G +S ++ +P +S + V T A+ M
Sbjct 100 NAPDQQVARMRQAGLNPYMMLGQVNSG----NQSSIASTSSPDLNSSVSNVNTAAQ---M 152
Query 110 KNEKAIADATVNKLNAEA 127
+ ++ A V +NAEA
Sbjct 153 IQQSSLVAAQVRDMNAEA 170
> Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.BACEGG.02723
Length=252
Score = 32.0 bits (71), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (45%), Gaps = 10/98 (10%)
Query 39 WKRRVNYLEELNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIATDASAPNSQTPMGSSDFN 98
W+R +Y N P +Q+ + + AG+ P+ +G + AP T + + F+
Sbjct 52 WQRTTDY----NSPEQQMQRLKEAGLNPKLAYGTLADSKAGNVRSHAPIGSTFVETPKFD 107
Query 99 --FVTTIAERQRMKNEKAIADATVNKLNAEAEK-LRGD 133
F + + Q KN + DA N+ + + K +R D
Sbjct 108 DPFQSVLGATQAYKN---VIDANKNQFDLDLNKEMRTD 142
> Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.protein.BACEGG.02723
Length=397
Score = 32.3 bits (72), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (32%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query 29 EKNMALEHDYWKRRVNYLEELNKPSRQVAKWRSAGIAPQAVF-GNSPGGAGIATDASAPN 87
+KN E D W N E N + Q A+ AG+ P + G + G AG T S P
Sbjct 25 QKNRDFEVDMW----NKTNEYNSATNQRARLEEAGLNPYMMMNGGNAGEAGSVTAPSTPQ 80
Query 88 SQTPMGSSD 96
P + D
Sbjct 81 GAMPGATGD 89
Lambda K H a alpha
0.311 0.125 0.335 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 27695862