bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-20_CDS_annotation_glimmer3.pl_2_2

Length=135
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4            21.9    2.4
  Gokush_Human_feces_C_031_Microviridae_AG0433_putative.VP1           20.8    6.2
  Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4      20.8    7.1
  Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1       20.4    9.6


> Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4
Length=348

 Score = 21.9 bits (45),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query  69   LDYSSIFLPKGCYYLSDMELAGFIKALSFGASTFEMKLLPASAQMQGMIL  118
            L+YS  +  + CY  + M  A +   L++     +  L+PA  +  G ++
Sbjct  70   LEYSKQWADR-CYLEAKMWKANYWLTLTYDEEHIQHLLVPAVDKKTGEVI  118


> Gokush_Human_feces_C_031_Microviridae_AG0433_putative.VP1
Length=529

 Score = 20.8 bits (42),  Expect = 6.2, Method: Composition-based stats.
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)

Query  33  NGGYLVSFSQEE--PNGSFK  50
           N GYLV F  +E  P  SFK
Sbjct  36  NSGYLVPFYVDEVLPGDSFK  55


> Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4
Length=546

 Score = 20.8 bits (42),  Expect = 7.1, Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 21/43 (49%), Gaps = 12/43 (28%)

Query  51   SYDPSYSLDFEASKLSTYLDYSSIFLP------KGCY-YLSDM  86
            SYD  + ++F+A K     DY   F        KGCY +L DM
Sbjct  114  SYDDDFRVEFKADK-----DYIENFKKQANLDVKGCYPHLKDM  151


> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650

 Score = 20.4 bits (41),  Expect = 9.6, Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 0/22 (0%)

Query  37   LVSFSQEEPNGSFKSYDPSYSL  58
            L SF++  PNG   +    Y L
Sbjct  332  LKSFAERLPNGKLNTSSVQYGL  353



Lambda      K        H        a         alpha
   0.312    0.130    0.355    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 8470575