bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-21_CDS_annotation_glimmer3.pl_2_3
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical.... 216 5e-75
Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.pr... 215 6e-75
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 22.7 1.1
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 21.6 2.1
Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1 21.2 3.4
Alpavirinae_CF7ML_001_Microviridae_AG0309_putative.VP1 20.8 4.4
> Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical.protein
Length=127
Score = 216 bits (551), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 105/107 (98%), Gaps = 0/107 (0%)
Query 1 MARNTKPDYKSVECNFDVRKDFERTKPNLGLTPQQVADMAKRGIPVSPMNVNFIDVNGDA 60
MARNTKPDYKSV C FD++KDFERTKPNLGLTPQQVA+MAKRGIPVSPMNVNFIDVNGDA
Sbjct 21 MARNTKPDYKSVTCEFDIQKDFERTKPNLGLTPQQVAEMAKRGIPVSPMNVNFIDVNGDA 80
Query 61 SWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN 107
SWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN
Sbjct 81 SWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN 127
> Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.protein
Length=107
Score = 215 bits (548), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 105/107 (98%), Gaps = 0/107 (0%)
Query 1 MARNTKPDYKSVECNFDVRKDFERTKPNLGLTPQQVADMAKRGIPVSPMNVNFIDVNGDA 60
MARNTKPDYK VECNFDV+KDFERTKPNLGLTPQQVA+MAKRGIPVSPMNVNFIDVNGDA
Sbjct 1 MARNTKPDYKCVECNFDVQKDFERTKPNLGLTPQQVAEMAKRGIPVSPMNVNFIDVNGDA 60
Query 61 SWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN 107
SWNIEPQF RDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN
Sbjct 61 SWNIEPQFCRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN 107
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 22.7 bits (47), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 18/34 (53%), Gaps = 0/34 (0%)
Query 27 PNLGLTPQQVADMAKRGIPVSPMNVNFIDVNGDA 60
P +GLT + + G V+ +N +D +G+A
Sbjct 456 PLVGLTTYESVSLNDAGHTVTTVNTAIVDEDGNA 489
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 21.6 bits (44), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 8/16 (50%), Positives = 11/16 (69%), Gaps = 0/16 (0%)
Query 28 NLGLTPQQVADMAKRG 43
NLGL P ++D+ K G
Sbjct 243 NLGLNPNIISDLLKIG 258
> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650
Score = 21.2 bits (43), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (3%)
Query 27 PNLGLTPQQVADMAKRGIPVSPMNVNFIDVNGDA 60
PN G ++AD+ PV N F D N DA
Sbjct 593 PNAGTNETKIADLTTYIDPVK-FNYIFADTNLDA 625
> Alpavirinae_CF7ML_001_Microviridae_AG0309_putative.VP1
Length=692
Score = 20.8 bits (42), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 19/34 (56%), Gaps = 0/34 (0%)
Query 12 VECNFDVRKDFERTKPNLGLTPQQVADMAKRGIP 45
VE N+D + + + + + Q ++DM+ G+P
Sbjct 657 VEVNYDGTEKTDPFRISSRFSVQYISDMSVSGMP 690
Lambda K H a alpha
0.316 0.131 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5733300