bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-23_CDS_annotation_glimmer3.pl_2_4
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_30_040_Microviridae_AG0136_hypothetical.p... 100 2e-30
Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.... 30.4 5e-04
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 26.6 0.013
Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.p... 24.3 0.13
Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.... 23.9 0.13
Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.... 23.9 0.13
Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.p... 23.1 0.29
Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.p... 23.1 0.32
Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.p... 19.2 7.0
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 19.2 9.3
> Alpavirinae_Human_gut_30_040_Microviridae_AG0136_hypothetical.protein
Length=93
Score = 100 bits (250), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%), Gaps = 0/73 (0%)
Query 1 MDQQEAVKWAYRQDVVKVSCVKEGEEDKFILTVGQYNVTPIVFDTQEQAETFLDTVFKLT 60
MD++E KW+ +QD+VKVSC+K GEEDKF+ T+G+Y TP VFDTQ++A +L+ FKLT
Sbjct 9 MDEKEIKKWSKKQDIVKVSCIKVGEEDKFVYTIGEYVATPHVFDTQQEAINYLEENFKLT 68
Query 61 NFDLAIIGAMCQR 73
N DL IIG MCQ+
Sbjct 69 NMDLTIIGTMCQK 81
> Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.protein
Length=87
Score = 30.4 bits (67), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 12/31 (39%), Positives = 22/31 (71%), Gaps = 0/31 (0%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDT 55
E + FI+T+G++ T F T+E+A+ ++DT
Sbjct 15 ENNDFIVTIGRHLATEKKFKTKEEAQAYIDT 45
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 26.6 bits (57), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (63%), Gaps = 0/32 (0%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDTV 56
E + FI+T+G + TP F + ++AE ++ V
Sbjct 20 ENNDFIITLGDHLATPEHFKSYDEAENSIEAV 51
> Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.protein
Length=79
Score = 24.3 bits (51), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 0/26 (0%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAE 50
E D+FI+T+G + T F +++ AE
Sbjct 15 ESDEFIITIGNHLATEEKFKSRKAAE 40
> Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.protein
Length=75
Score = 23.9 bits (50), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/47 (26%), Positives = 25/47 (53%), Gaps = 6/47 (13%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDTVFKLTNFDLAIIGAMC 71
+E++FI+T+G + T F +++ AE ++ D ++ AM
Sbjct 16 DENEFIITIGNHLATEEKFKSRKAAE------MRINKTDWNLVSAMV 56
> Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.protein
Length=79
Score = 23.9 bits (50), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 0/30 (0%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLD 54
E D+FI+T+G + T F +++ AE ++
Sbjct 15 ESDEFIITIGNHLATEEKFKSRKAAEMRIN 44
> Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.protein
Length=72
Score = 23.1 bits (48), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 10/51 (20%), Positives = 29/51 (57%), Gaps = 5/51 (10%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDT-----VFKLTNFDLAIIGAM 70
EE+K+++ + + F+T+E+AE ++++ +F L + + ++ +
Sbjct 15 EEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNLNVYTIQVLKTI 65
> Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.protein
Length=72
Score = 23.1 bits (48), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 10/51 (20%), Positives = 29/51 (57%), Gaps = 5/51 (10%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDT-----VFKLTNFDLAIIGAM 70
EE+K+++ + + F+T+E+AE ++++ +F L + + ++ +
Sbjct 15 EEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNLNVYTIQVLKTI 65
> Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.protein
Length=76
Score = 19.2 bits (38), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 7/31 (23%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
Query 25 EEDKFILTVGQYNVTPIVFDTQEQAETFLDT 55
EE+ +++ G + F+T + A+ +++T
Sbjct 14 EENDYVIVCGNVQASKEHFNTVKAAQEYINT 44
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 19.2 bits (38), Expect = 9.3, Method: Composition-based stats.
Identities = 11/37 (30%), Positives = 18/37 (49%), Gaps = 0/37 (0%)
Query 31 LTVGQYNVTPIVFDTQEQAETFLDTVFKLTNFDLAII 67
LT Q V P+V T ++ + D +T + AI+
Sbjct 447 LTAPQQGVAPLVGLTTYESVSLNDAGHTVTTVNTAIV 483
Lambda K H a alpha
0.322 0.135 0.395 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4053560