bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-26_CDS_annotation_glimmer3.pl_2_1

Length=567
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1         635   0.0
  Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1        380   9e-125
  Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1        369   9e-121
  Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1        366   1e-119
  Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1        362   3e-118
  Alpavirinae_Human_gut_31_037_Microviridae_AG0297_putative.VP1         362   1e-117
  Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1        355   3e-115
  Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1         303   2e-95
  Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1         301   7e-95
  Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1        300   2e-94


> Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1
Length=679

 Score =   635 bits (1638),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 332/578 (57%), Positives = 418/578 (72%), Gaps = 16/578 (3%)

Query  1    MKFIKYPIIGGIRKTLWDDSTTMEGSNGTLKREVNPSSLPAYLGYRALSNEIETPVLTVK  60
            MK +K+P+I  I  + WD +  M GSN TL R+++PSSL +YLGY++ + E      T  
Sbjct  107  MKKVKFPVIK-IDASDWDLNKKMVGSNNTLLRQIHPSSLLSYLGYKSFNKETGVD-WTWN  164

Query  61   AIPFFGYFDIFKNYYANKQEEYFYTIGGVTLFTESSALTENNTFCLSSF--ANINGVWTK  118
                  Y+DIFKNYYANKQEE FYTI G      S+  +  NT+ +++    ++NG++  
Sbjct  165  ITKALMYYDIFKNYYANKQEESFYTIDGARELKSSNLSSNPNTYFIAAIDGPDVNGLYRI  224

Query  119  GADIKNTEKGTVTL-GVGNYVGFSINEDVPRGLEEIVINGRISFSL--NNVVHEFTGQSI  175
               I+N     +T+ G G  + F   E+    L    +NG I F+            + I
Sbjct  225  QQIIQNPTTEVITIQGDGVIIAFRDLENY--DLNNTYLNGNIVFTPAGEGRTINLGLKPI  282

Query  176  KYLIDNKILKEIDYKKASIPNLKTFIFYENKT----TETSTFKIEKIIRLGSKNAVYNKY  231
              LI   +L+++      I        Y+ KT    T T +  I   I+  + +  Y+K+
Sbjct  283  SQLIGEGVLEDVSSSIVPISGKPLLRAYKFKTLDGETATKSINITNKIKAYTVSGNYSKF  342

Query  232  PLKRIDDMREAILTSGKEQFDGARFEFLSDIFKPIIDLNSSANKAR--PSCSYPLVGLAL  289
             L  IDDMRE IL++GK+Q+  +  EF++ +++  ID++ ++N     P+ +YP+VGLAL
Sbjct  343  NLSSIDDMRENILSAGKQQY-VSNDEFITKLYENAIDIHDTSNTPTYIPNSAYPMVGLAL  401

Query  290  KTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGS  349
            KTYQSDINTNWVNTEW+DG++GINSITAIDTS GSFTLDTLNLAKKVYTMLNRIA+SDGS
Sbjct  402  KTYQSDINTNWVNTEWIDGETGINSITAIDTSSGSFTLDTLNLAKKVYTMLNRIAVSDGS  461

Query  350  YNAWIQTVYTSGGLNHVETPIYLGGSSMEIEFQEVVNNSGTEDQPLGSLAGRGVTDNHKG  409
            YNAWIQTVYTSGGLNH+ETP+YLGGSS+EIEFQEV+NNSGTEDQPLG+LAGRGV  NHKG
Sbjct  462  YNAWIQTVYTSGGLNHIETPLYLGGSSLEIEFQEVINNSGTEDQPLGALAGRGVATNHKG  521

Query  410  GVIKYKPDEPGYIFCITSITPRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQDRLYKNIN  469
            G I +K DEPGYIFCITSITPRVDY+QGN+WDL +E+LDDLHKPQLDGIGFQDRLY+++N
Sbjct  522  GNIVFKADEPGYIFCITSITPRVDYFQGNEWDLYLESLDDLHKPQLDGIGFQDRLYRHLN  581

Query  470  SSAKREDLIKSIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVFGDIDTYTTYIQPH  529
            SS  REDL  SIGKQPAW+ YMT+ N+ YGNFAL+ENEGWMCLNR+F + DTYTTYIQPH
Sbjct  582  SSCVREDLNISIGKQPAWVQYMTNVNKTYGNFALVENEGWMCLNRIFENTDTYTTYIQPH  641

Query  530  LYNNIFADTDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
            LYNNIFADTD+ AQNFWVQIAFN + RRVMSAK+IPN+
Sbjct  642  LYNNIFADTDLTAQNFWVQIAFNYKPRRVMSAKIIPNI  679


> Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1
Length=668

 Score =   380 bits (976),  Expect = 9e-125, Method: Compositional matrix adjust.
 Identities = 237/546 (43%), Positives = 307/546 (56%), Gaps = 80/546 (15%)

Query  61   AIPFFGYFDIFKNYYANKQEEYFYTIGGVTLFTESSALTENNTFCLSSFANINGVWTKGA  120
            AIP  GY DIFKNYYANKQEE F  IG       ++A  +NN              + G 
Sbjct  164  AIPLLGYLDIFKNYYANKQEEKFKFIGADPYLIINTANLKNNPI------------STGV  211

Query  121  DIKNTEKGTVTLGVGNYVGFSINEDVPRGLEEIVINGRISFSLNNVVHEFTGQSIKYLID  180
              +    GT  + + N  G S  ++V +   EI    +I         E T         
Sbjct  212  GSQRVTGGTFNITLQN--GPSDWKEVNKDDIEITFTQKIGTETEYQTVERT---------  260

Query  181  NKILKEIDYKKASIPNLKTFIFYENKTTET----------STFKIEKIIRLGSKNAVYNK  230
               L E+     S P L       N +  T          +++KI+ I  + ++N     
Sbjct  261  -YTLTELGKWFNSTPILTILTLAYNNSGTTGSQDLLYGIPTSYKIKNITNILTEN-----  314

Query  231  YPLKRIDDMREAILTSGKEQFD-------GARFEFLSDIFKPIIDLNSSA-------NKA  276
              L  +D +RE IL  G E+F+       G    F     + I+  N S+       N++
Sbjct  315  --LSDLDQLREDILAKGNERFEMNLTTKLGGSINFT--YIQHILGGNESSYEKATKYNRS  370

Query  277  RPSCSYPLVGLALKTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKV  336
             P C     GL LKTYQSDI TNW+N+EW+DG++GI++ITAI T G  FT+D LNL+KKV
Sbjct  371  SPQC-----GLLLKTYQSDIFTNWINSEWIDGENGISAITAISTEGNKFTIDQLNLSKKV  425

Query  337  YTMLNRIAISDGSYNAWIQTVYTSGGLNHVETPIYLGGSSMEIEFQEVVNNSGTEDQPLG  396
            Y MLNRIAIS G+Y  W++TVYTS    H ETP+Y GG S EIEFQEVV+NS TE++PLG
Sbjct  426  YDMLNRIAISGGTYQDWVETVYTSEWNMHTETPVYEGGMSAEIEFQEVVSNSATEEEPLG  485

Query  397  SLAGRGVTDNHKGGVIKYKPDEPGYIFCITSITPRVDYYQGNDWDL-EIETLDDLHKPQL  455
            +LAGRG   N KGG +  K  EP YI  I SITPRVDY QGNDWD+  ++T+DD+HKPQL
Sbjct  486  TLAGRGFASNKKGGQLHIKVTEPCYIMGIASITPRVDYCQGNDWDITSLDTMDDIHKPQL  545

Query  456  DGIGFQDRLYKNINSSAKREDLIKSIGKQPAWLDYMTSFNRNYGNFALIENEG--WMCLN  513
            D IG+QD + + +N+ A R     ++GKQP+W++YMTSFN+ YG FA  + EG  +M LN
Sbjct  546  DSIGYQDLMQEQMNAQASRN---LAVGKQPSWINYMTSFNKTYGTFANEDGEGEAFMVLN  602

Query  514  RVFG--DIDTYT----------TYIQPHLYNNIFADTDVAAQNFWVQIAFNVEARRVMSA  561
            R F   +ID  T          TYI P  YN IFA+T   + NFWVQ+ F +EARRVMSA
Sbjct  603  RYFDIKEIDAGTETGVKVYNTSTYIDPSQYNYIFAETGTKSMNFWVQLGFGIEARRVMSA  662

Query  562  KVIPNL  567
              IPNL
Sbjct  663  SQIPNL  668


> Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1
Length=637

 Score =   369 bits (946),  Expect = 9e-121, Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 323/564 (57%), Gaps = 88/564 (16%)

Query  33   EVNPSSLPAYLGYRALSNEIETPVLTV--KAIPFFGYFDIFKNYYANKQEEYFYTIGGVT  90
            +VNPS L AYLG R   + I T    +   A+P  GY+DIFKNYYAN QEE FYTIGGV 
Sbjct  133  QVNPSCLLAYLGIRGYGSLIGTSAKYIGKNAVPLIGYYDIFKNYYANTQEEKFYTIGGV-  191

Query  91   LFTESSALTENNTFCLSSFANINGVWTKGADIKNTEKGTVTLGVGNYVGFSINEDVPRGL  150
                   L  N T+             +G +I N+    + L  G+ + FS   ++    
Sbjct  192  -------LPLNVTY-------------EGTEIPNS-GNNIALSNGDTMVFSNVTNI----  226

Query  151  EEIVINGRISFSLNNVVHEFTGQSIKYLIDNKILKEIDYKKASIPNLKTFIFYENKTTET  210
                         N+VV          LI ++ L+  ++K + +  +       +K    
Sbjct  227  -------------NDVV----------LIGSENLRYREWKPSDLGTVTGLTLNIDKLLAG  263

Query  211  STFKIEKIIRLGSKNAVYNKYPLKRIDDMREAILTS-GKEQFDGARFEFLSDIFKPIIDL  269
            + + + K+ + G  +   N++ L+ +D +R+ ILT+ G   F+    + +  + K   + 
Sbjct  264  NEYILHKMYKKGMVD--LNQWELESLDTLRDNILTTKGNVAFNVTGKDSVP-VLKQFNER  320

Query  270  NSSANKARPSCSYPLVGLALKTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTLDT  329
                       + P  GLALKTY SD+  NW+NT+W++G +GIN I+++D S GS ++D 
Sbjct  321  FGEKQTGYLKTTAPQFGLALKTYNSDLYQNWINTDWIEGVNGINEISSVDVSDGSLSMDA  380

Query  330  LNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGG-LNHVETPIYLGGSSMEIEFQEVVNNS  388
            LNLA+KVY MLNRIA+S G+Y  W++TV+T G  +   ETPI+ GG+S EI FQEV++NS
Sbjct  381  LNLAQKVYNMLNRIAVSGGTYRDWLETVFTGGEYMERCETPIFEGGTSQEIIFQEVISNS  440

Query  389  GTEDQPLGSLAGRGVTDN-HKGGVIKYKPDEPGYIFCITSITPRVDYYQGNDWDLEIETL  447
             TE +PLG+LAGRG+T N  +GG +K K  EPGYI CI SITPR+DY QGN WD E++T+
Sbjct  441  ATEQEPLGTLAGRGITTNKQRGGHVKIKVTEPGYIMCICSITPRIDYSQGNQWDTELKTM  500

Query  448  DDLHKPQLDGIGFQDRLYKNINS---------SAKREDLIKSIGKQPAWLDYMTSFNRNY  498
            DDLHKP LDGIG+QD    +INS         S     +  + GK  AW++YMT+ NR Y
Sbjct  501  DDLHKPALDGIGYQD----SINSERAWWAGYYSQGPLKVETAAGKTVAWINYMTNVNRTY  556

Query  499  GNFALIENEGWMCLNRVF---------------GDIDTYTTYIQPHLYNNIFADTDVAAQ  543
            GNFA+ +NE +M +NR +               GD+   +TYI P  +N IFADT + A 
Sbjct  557  GNFAIKDNEAFMVMNRNYELQINGGPTPTSIRIGDL---STYIDPVKFNYIFADTSLEAM  613

Query  544  NFWVQIAFNVEARRVMSAKVIPNL  567
            NFWVQ  F+++ARR++SAK IPNL
Sbjct  614  NFWVQTKFDIKARRLISAKQIPNL  637


> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651

 Score =   366 bits (940),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 235/589 (40%), Positives = 328/589 (56%), Gaps = 68/589 (12%)

Query  1    MKFIKYPIIGGIRKTLWDDSTTMEGSNGTLKREVNPSSLPAYLG---YRALSNEIETPVL  57
            M  IK P +      L D      G +     ++NPS L +YLG   Y  +     T   
Sbjct  109  MSQIKLPQLSVTLNKLQDQP----GEDEQQWSQINPSCLLSYLGIKGYGGIHKAAPTTEA  164

Query  58   TVKAIPFFGYFDIFKNYYANKQEEYFYTIGGVTLFTESSALTENNTFCLSSFANINGVWT  117
               A+   GY+DIFKNYYANKQEE +Y IG      +  ++  NN   +      N + +
Sbjct  165  QKNAVKVLGYWDIFKNYYANKQEENYYMIGS----NDPLSIKINNVTIIDP----NNIPS  216

Query  118  KGADIKNTEKGTVTLGVGNYVGFSINEDVPRGLEEIVINGRISFSLNNVVHEFTGQSIKY  177
                IK +     T+ + + +      +V   + + + +  +  ++N V     GQ +  
Sbjct  217  NIGTIKKSG----TIAIADPLKIYNTSNVTLWVTQQIGHSPVKMTVNEV-----GQGV--  265

Query  178  LIDNKILKEIDYKKASIPNLKTFIFYENKTTETSTFKIEKIIRLGSKNAVYNKYPLKRID  237
                   +E             F+   N   E S++ I +II+   + A+ + +PL   D
Sbjct  266  ------WEE-----------NEFVITANNVPENSSWWI-RIIQSTQQQALVS-FPLDEFD  306

Query  238  DMREAILTS-GKEQFDGARFEFLSDIFKPIIDLNSSANKARPSCSYPLVGLALKTYQSDI  296
             +R+ IL   G + F  ++    S     I +   S NK +   + P  GL LKTY SD+
Sbjct  307  TLRDEILAKKGNQAFILSKNS--STKIAKIFNERGSNNKLK--TTRPQYGLLLKTYNSDL  362

Query  297  NTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQT  356
              NW+NT+W+DG +GIN I+++D S G  T+D LNLA+KVY MLNRIA+S G+Y  W++T
Sbjct  363  YQNWINTDWIDGANGINEISSVDVSEGKLTMDALNLAQKVYNMLNRIAVSGGTYRDWLET  422

Query  357  VYTSGG-LNHVETPIYLGGSSMEIEFQEVVNNSGTEDQPLGSLAGRGV-TDNHKGGVIKY  414
            VY SG  +   ETP + GG+S EI FQEVV+NS TED+PLG+LAGRGV     KGG IK 
Sbjct  423  VYASGQYIERCETPTFEGGTSQEIVFQEVVSNSATEDEPLGTLAGRGVNAGKQKGGKIKV  482

Query  415  KPDEPGYIFCITSITPRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQDRL------YKNI  468
            +  EPGYI CITSITPR+DY QGND+D + +TLDD+HKP LDGIG+QD +      + ++
Sbjct  483  RATEPGYIMCITSITPRIDYSQGNDFDTDWKTLDDMHKPALDGIGYQDSVNTGRAWWDDV  542

Query  469  NSSAKREDLIK-SIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVF---------GD  518
             + A+  +L+K + GK  AW+DYMT+ N+ YGNFA   +E +M LNR +           
Sbjct  543  YTGAQETNLVKHTAGKTVAWIDYMTNVNKTYGNFAAGMSEAFMVLNRNYEIKYDSGTNPR  602

Query  519  IDTYTTYIQPHLYNNIFADTDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
            I   TTYI P  YN IFADT + A NFWVQI F++ ARR+MSAK IPNL
Sbjct  603  IADLTTYIDPIKYNYIFADTSIDAMNFWVQIKFDITARRLMSAKQIPNL  651


> Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1
Length=640

 Score =   362 bits (930),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 230/566 (41%), Positives = 315/566 (56%), Gaps = 89/566 (16%)

Query  33   EVNPSSLPAYLGYRALSNEI--ETPVLTVKAIPFFGYFDIFKNYYANKQEEYFYTIGGVT  90
            ++NPS L AYLG R   + I   T  +   A+P  GY+DIFKNYYAN QE+ FYTIG   
Sbjct  133  QINPSCLLAYLGIRGYGSLIGVTTKYVEKNAVPLIGYYDIFKNYYANTQEDKFYTIGSGR  192

Query  91   LFTESSALTENNTFCLSSFANINGVWTKGADIKNTEKGTVTLGVGNYVGFSINEDVPRGL  150
             FT                  IN V     DI  T      L VG+ + F+     P   
Sbjct  193  KFT----------------ITINNVSYPITDINKT------LQVGDVIKFT---PTPTKE  227

Query  151  EEIVINGRISF--SLNNVVHEFTGQSIKYLIDNKILKEIDYKKASIPNLKTFIFYENKTT  208
            E+    G + F  S N+    ++G  I    +       D+K   I  LK    YE    
Sbjct  228  EQ----GNLIFIGSENSRYRRWSGSDIGTWTEQN-----DFK---ISGLKAGKRYE----  271

Query  209  ETSTFKIEKIIRLGSKNAVYNKYPLKRIDDMREAILTS-GKEQFDGARFEFLSDIFKPII  267
                  +++I      +    ++ L+ +D +R+ ILT+ G   F     + +  + +   
Sbjct  272  ------LDRI--FNELSVGLQQWELESLDTLRDNILTTKGNITFSVTGIDSVPVLQQ--F  321

Query  268  DLNSSANKARPSCSYPLVGLALKTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTL  327
            +    AN        P  GLALKTY SD+  NW+NT+W++G +GIN I+++D S G+ ++
Sbjct  322  NERLGANSEHLKTIGPQFGLALKTYNSDLYQNWINTDWIEGVNGINEISSVDVSDGNLSM  381

Query  328  DTLNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGG-LNHVETPIYLGGSSMEIEFQEVVN  386
            D LNLA+KVY MLNRIA+S G+Y  W++TV+T G  +   ETP++ GG+S EI FQEV++
Sbjct  382  DALNLAQKVYNMLNRIAVSGGTYRDWLETVFTGGEYMERCETPVFEGGTSQEIVFQEVIS  441

Query  387  NSGTEDQPLGSLAGRGVTDN-HKGGVIKYKPDEPGYIFCITSITPRVDYYQGNDWDLEIE  445
            NS TE +PLG+LAGRG+T N  +GG IK K  EPGYI CI SITPR+DY QGN WD E++
Sbjct  442  NSATEQEPLGTLAGRGITTNKQRGGHIKIKVTEPGYIMCICSITPRIDYSQGNQWDTELK  501

Query  446  TLDDLHKPQLDGIGFQDRL---------YKNINSSAKREDLIKSIGKQPAWLDYMTSFNR  496
            T+DDLHKP LDGIG+QD +         Y N +   K      + GK  AW++YMT+ NR
Sbjct  502  TMDDLHKPALDGIGYQDSINSERAWWAGYYNADPDKKE----TAAGKTVAWINYMTNVNR  557

Query  497  NYGNFALIENEGWMCLNR---------------VFGDIDTYTTYIQPHLYNNIFADTDVA  541
             YGNFA+ +NE +M +NR                 GD+   +TYI P  +N IFADT + 
Sbjct  558  TYGNFAIKDNEAFMVMNRNYELEITGGSTPTKITIGDL---STYIDPAKFNYIFADTSLE  614

Query  542  AQNFWVQIAFNVEARRVMSAKVIPNL  567
            A NFWVQ  F+++ARR++SAK IPNL
Sbjct  615  AMNFWVQTKFDIKARRLISAKQIPNL  640


> Alpavirinae_Human_gut_31_037_Microviridae_AG0297_putative.VP1
Length=668

 Score =   362 bits (928),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 231/570 (41%), Positives = 304/570 (53%), Gaps = 71/570 (12%)

Query  34   VNPSSLPAYLGYR---ALSNEIETPVLTVKAIPFFGYFDIFKNYYANKQEEYFYTIGGVT  90
            + PSSL  YLG      ++           A+P   Y+DIFKNYYANKQE+ FY      
Sbjct  134  LQPSSLLTYLGISNVGMINGSDPFAERNFNAVPMLAYYDIFKNYYANKQEDKFY------  187

Query  91   LFTESSALTENNTFCLSSFANINGVWTKGADIKNTEKGTVTLGVGNYVGFSINEDVPRGL  150
                           + +F NI    +  + ++N        G  N +   +  D     
Sbjct  188  ---------------VRNFKNIVSAVSGWSKLEN--------GSQNRLWNELTADRFNSA  224

Query  151  EEIVINGRISFSLNNVVHEFTGQS---IKYLIDNKILKEIDYKKASIPNLKTFIFYE-NK  206
              + +N  I  + +  + +   ++   I Y   N    E  Y    IP +  F +   + 
Sbjct  225  YSMSLNADIKITTSEAISKDNLEAKCEIYYGYVNNTPAENLYTFKWIPLITYFDYISYDS  284

Query  207  TTETSTFKIEKI-------------IRLGSKNAVYNKYPLKRIDDMREAILTSGKEQ---  250
             T+T T+++++              I++G  +A      L  ID +RE IL +   +   
Sbjct  285  ATQTYTYRVKRTEYNRTIVFLMGLRIQIGRNSAQI----LDDIDTIREDILATPGNRNWI  340

Query  251  FDGARFEFLSDIFKPIIDLNSSANKARPSCSY-PLVGLALKTYQSDINTNWVNTEWLDGD  309
            F     +     F   +   SS NK      + P  GL  KTYQSD+  NW+NTEWLDGD
Sbjct  341  FQNREGQENEIPFMNFLMNQSSNNKNGGGFLFSPEWGLVTKTYQSDLCQNWINTEWLDGD  400

Query  310  SGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGGLNHVETP  369
             GIN ITA+    G FT+D LNLA KVY  LNRIAISDGSY +W++T +T       ETP
Sbjct  401  DGINQITAVAVEDGKFTIDALNLANKVYNYLNRIAISDGSYRSWLETTWTGSYTERTETP  460

Query  370  IYLGGSSMEIEFQEVVNNSGTEDQPLGSLAGRGVTDNHKGGVIKYKPDEPGYIFCITSIT  429
            IY GGSS EI FQEVV+ S   D+PLGSLAGRG   NHKGG +  +  EPGY+  ITSIT
Sbjct  461  IYCGGSSAEIIFQEVVSTSAATDEPLGSLAGRGTDSNHKGGYVTVRATEPGYLIGITSIT  520

Query  430  PRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQDRLYKNINSSAKREDLI------KSIGK  483
            PR+DY QGN WD+ ++++DDLHKP LDGIGFQD   + +++   + + I      K IGK
Sbjct  521  PRLDYTQGNQWDVNLDSIDDLHKPALDGIGFQDLSAELLHAGTTQINTINDTITQKFIGK  580

Query  484  QPAWLDYMTSFNRNYGNFALIENEGWMCLNRVFG------DIDTYTTYIQPHLYNNIFAD  537
            QPAW+DYMT+ NR YGNF    NE +M L+R +        I   TTYI P LYN IFAD
Sbjct  581  QPAWIDYMTNINRAYGNFR--TNENFMILSRQYSLDYKKNTIKDMTTYIDPDLYNGIFAD  638

Query  538  TDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
                AQNFWVQI   +EARR+MSAK+IPNL
Sbjct  639  QSFDAQNFWVQIGIEIEARRLMSAKIIPNL  668


> Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1
Length=657

 Score =   355 bits (911),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 230/579 (40%), Positives = 313/579 (54%), Gaps = 84/579 (15%)

Query  29   TLKREVNPSSLPAYLGYRALSNEIETPVLTVKA----IPFFGYFDIFKNYYANKQEEYFY  84
            T   ++  +S+  Y+G R       T   TVK     +P   Y+DIFKNYYANKQEE FY
Sbjct  119  TKDNKMGKASIAEYMGMR--KQPFGTDSSTVKGDYQIVPILSYYDIFKNYYANKQEERFY  176

Query  85   TIGGVTLFTESSALTENNTFCLSSFANINGVWTKGA---------DIKNTEKGTVTLG--  133
             +GG  +   ++ ++ + T  +  +A    +              +I+N ++   T+   
Sbjct  177  MMGGSVIQNATTIVSNDFTGDIGYYAKDTLICKTETTVTITGTDLNIENIKEVKFTIDTD  236

Query  134  -----VGNYVGFSINEDVPRGLEEIVINGRISF--SLNNVVHEFTGQSIKYLIDNKILKE  186
                 + N  G  I + V  G  +I+I  ++++   ++  +   TG+SI           
Sbjct  237  PIYIYIKNSAGKIIWDIVEAGKNKIIIKSKLNYYYQISRPIQGETGKSI-----------  285

Query  187  IDYKKASIPNLKTFIFYENKTTETSTFKIEKIIRLGSKNAVY-NKYPLKRIDDMREAILT  245
                      LK        TTE         I+ G+    Y + +PL  IDD+RE IL+
Sbjct  286  ---------TLK-------GTTEN--------IKQGTVTKAYTSSFPLTEIDDLREYILS  321

Query  246  SGKEQFDGARFE-------FLSDI-FKPIIDLNSSANKARPSCSYPLVGLALKTYQSDIN  297
             G++QF   R         F+ D+ F P  + N       P  +  + GL LKTYQSD+ 
Sbjct  322  MGRKQFHIGRDSDEKLKSLFIFDVLFSP--NFNEHEESIPPIANTEMGGLCLKTYQSDLF  379

Query  298  TNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQTV  357
             NWVN EW+DGD+GIN++T +D S G   LD LNLA+KVY MLNRIAIS GSY  WI+TV
Sbjct  380  NNWVNKEWVDGDNGINAVTDVDVSEGKLNLDALNLAQKVYNMLNRIAISGGSYKDWIETV  439

Query  358  YTSGGLNHVETPIYLGGSSMEIEFQEVVNNSGTE----DQPLGSLAGRGVTDNHKGGVIK  413
            YT+      ETP+Y GG S  I+F+ VV+NS +     ++PLGSLAGRG      GG I+
Sbjct  440  YTTDYYFRAETPVYEGGMSTTIDFEAVVSNSASTASGIEEPLGSLAGRGFNQGKNGGKIR  499

Query  414  YKPDEPGYIFCITSITPRVDYYQGNDWDL-EIETLDDLHKPQLDGIGFQDRLYKNINSSA  472
             K +EP YI  I SITP VDY QGNDWD+ +++T+DDLHKPQLDGIG+QD L   +N  A
Sbjct  500  IKCNEPCYIIGIASITPNVDYSQGNDWDMTQLKTMDDLHKPQLDGIGYQDLLSNQMNGLA  559

Query  473  KREDLIKSIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVF------GDIDTYTTYI  526
               D   +IGKQPAWL+YMT  N+ Y +FA  E E +M LNR++      G I   +TYI
Sbjct  560  NPTD---AIGKQPAWLNYMTDVNKTYADFAAGETESYMVLNRIYDVNEETGTIINPSTYI  616

Query  527  QPHLYNNIFADTDVAAQNFWVQIAFNVEARRVMSAKVIP  565
             P  Y  IFA      ++FWVQI   + ARRVMSA  IP
Sbjct  617  SPKDYTYIFATNTDTNRDFWVQIGKKIIARRVMSAAQIP  655


> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650

 Score =   303 bits (775),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 166/355 (47%), Positives = 229/355 (65%), Gaps = 22/355 (6%)

Query  231  YPLKRIDDMREAILTS-GKEQFDGARFEFLSDIFKPIIDLNSSANKARPSCSYPLVGLAL  289
            YPL+ ID +R+ ILT+ G   F+      +S + K   +   +      S  Y   GL L
Sbjct  300  YPLEDIDTLRDNILTTKGNIVFNVTGNNSIS-LLKSFAERLPNGKLNTSSVQY---GLCL  355

Query  290  KTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGS  349
            KTY SD+  NW+NTEW+DG +GIN I+A+D + G  T+D LNL++K+Y MLNRIA+S G+
Sbjct  356  KTYNSDLLQNWINTEWIDGVAGINEISAVDVTDGKLTMDALNLSQKIYNMLNRIAVSGGT  415

Query  350  YNAWIQTVYTSGG-LNHVETPIYLGGSSMEIEFQEVVNNSGTEDQPLGSLAGRGV-TDNH  407
            Y  W++TV+T G  +   ETP++ GG S E+ FQEV++NS + +QPLG+LAGRG  T   
Sbjct  416  YRDWLETVFTGGNYMERCETPMFEGGMSTEVVFQEVISNSASGEQPLGTLAGRGYDTGKQ  475

Query  408  KGGVIKYKPDEPGYIFCITSITPRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQDRL--Y  465
            KGG IK K  EP +I  I SITPR+DY QGN++  E++T+DD+HKP LDGIG+QD L   
Sbjct  476  KGGHIKIKVTEPCFIMGIGSITPRIDYSQGNEFFNELQTVDDIHKPALDGIGYQDSLNWQ  535

Query  466  KNINSSAKRED---LIKSIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVF------  516
            +      + +D   +  S GK  AW++YMT+ NR +GNFA+ +NE +M LNR +      
Sbjct  536  RAWWDDTRMQDNGRIQSSAGKTVAWINYMTNINRTFGNFAINDNEAFMVLNRNYELNPNA  595

Query  517  ----GDIDTYTTYIQPHLYNNIFADTDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
                  I   TTYI P  +N IFADT++ A NFWVQ  F+++ RR++SAK IPNL
Sbjct  596  GTNETKIADLTTYIDPVKFNYIFADTNLDAMNFWVQTKFDIKVRRLISAKQIPNL  650


 Score = 65.9 bits (159),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 45/81 (56%), Gaps = 5/81 (6%)

Query  33   EVNPSSLPAYLGYR-----ALSNEIETPVLTVKAIPFFGYFDIFKNYYANKQEEYFYTIG  87
            +VNPS L AYLG R     AL+   E   +   A+P  GY+DIFKN+YAN QEE FY IG
Sbjct  136  QVNPSCLLAYLGIRGFGINALTTPNENVTIQKMAVPLIGYYDIFKNFYANTQEENFYIIG  195

Query  88   GVTLFTESSALTENNTFCLSS  108
              T   +     +N    +S+
Sbjct  196  ATTAIDKVEVAQKNGNQIISN  216


> Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1
Length=657

 Score =   301 bits (772),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 212/575 (37%), Positives = 292/575 (51%), Gaps = 83/575 (14%)

Query  31   KREVNPSSLPAYLGYRALSNEIETPVLTVKAIPFFGYFDIFKNYYANKQEEYFYTIGGVT  90
            K + NPSSL +YLG++             +A+P+  Y DIFKNY+AN QE+ FY I G T
Sbjct  128  KIKYNPSSLYSYLGWKGTKQSATGIGAMKQAVPWLIYLDIFKNYFANTQEDNFYIITGST  187

Query  91   LFTESSALTENNTFCLSSFANINGVWTKGADIKNTEKGTVTLGVGNYVGFSINEDVPRGL  150
              T        N+F      +    W                                  
Sbjct  188  KGTVKFEQKGENSFTTEVGQDAEQSW----------------------------------  213

Query  151  EEIVINGRISFSLNNVVHEFTGQSIKYLIDNKILKEIDYKKASIPNLKTFIFYENKTTET  210
             +  IN   +   +N V  F G+  K +    I+K  +  K S       ++  N TT  
Sbjct  214  -KTPINNTATLEASNNVKNF-GKFWKSI----IIKVYNPSKQS----SLTVYISNATTNY  263

Query  211  STFKIEKIIRLGSK--------NAVYNKYPL--------KRIDDMREAILTSGK-EQFDG  253
            ST KI  + ++G+           VY K P+        K   +   +IL   K E  D 
Sbjct  264  STKKI-TLDKIGTNELTGYTIIQGVYIKTPVFGDTTDYKKMFQESLGSILKEEKLEVLDK  322

Query  254  ARFEFLSDIFKPIIDLNSSAN--------KARPSCSYPLVGLALKTYQSDINTNWVNTEW  305
             R E L +    I+ L ++ N          R +    L GL +KTY SDI  NWV TEW
Sbjct  323  IRDEILKNPGNNILQLQTTTNTDVNNLFEDIRKASKNKLGGLVIKTYDSDIFNNWVKTEW  382

Query  306  LDGDSGINSITAID-TSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGG-L  363
            +DG++GI+ +TA+     G+ T+D LNL +KVY MLNRIA+S G+Y  W++TVYT+G  L
Sbjct  383  IDGENGISKVTALKPNEDGTITMDALNLQQKVYNMLNRIAVSGGTYRDWLETVYTAGRYL  442

Query  364  NHVETPIYLGGSSMEIEFQEVV-NNSGTEDQPLGSLAGRGVTDN-HKGGVIKYKPDEPGY  421
            +  ETP++ GG S  IEF EVV   S  E Q LG LAGRG     +  G + ++ +EPGY
Sbjct  443  DRPETPVFQGGMSQMIEFDEVVATTSNNEGQALGELAGRGYARQPNSSGRLHFQVEEPGY  502

Query  422  IFCITSITPRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQDRLYKNINSSAKREDLIK--  479
            +  + +ITP VDY QGND+DL + T+DDLHKP LDGIG+QD + +        ++  K  
Sbjct  503  VMGLVAITPMVDYSQGNDFDLNLFTMDDLHKPALDGIGYQDLMNEQRAWWTATQNGTKIT  562

Query  480  --SIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVFGD-----IDTYTTYIQPHLYN  532
              + GK  AW+DYMT+FNR +GNFA  E+E +M LNR + D     I   +TYI P  + 
Sbjct  563  DTTPGKSVAWIDYMTNFNRTFGNFATGESEDFMVLNRNYEDDEADGISNGSTYINPQEHI  622

Query  533  NIFADTDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
            +IFADT + +QNFW+Q A  +  R   SAK IPN 
Sbjct  623  DIFADTALDSQNFWIQTACEITRRGNYSAKQIPNF  657


> Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1
Length=649

 Score =   300 bits (768),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 169/360 (47%), Positives = 225/360 (63%), Gaps = 32/360 (9%)

Query  231  YPLKRIDDMREAILTSGKEQFDGARFEFLSDIFKPIIDL------NSSANKARPSCSYPL  284
            YPL+ ID +R+ ILT+         F    D   P++        NS  N A  S  Y  
Sbjct  299  YPLEDIDTLRDNILTTKGN----ITFNVTGDESIPLLKSFAGRLPNSKLNTA--SVQY--  350

Query  285  VGLALKTYQSDINTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIA  344
             GL LKTY SD+  NW+NTEW+DG +GIN I+A+D + G  T+D LNLA+KVY MLNRIA
Sbjct  351  -GLCLKTYNSDLLQNWINTEWIDGVTGINEISAVDVTDGKLTMDALNLAQKVYNMLNRIA  409

Query  345  ISDGSYNAWIQTVYTSGG-LNHVETPIYLGGSSMEIEFQEVVNNSGTEDQPLGSLAGRGV  403
            +S G+Y  W++TV+T G  +   ETP++ GG S EI FQEV++NS + +QPLG+LAGRG 
Sbjct  410  VSGGTYRDWLETVFTGGNYMERCETPMFEGGMSTEIVFQEVISNSASGEQPLGTLAGRGY  469

Query  404  -TDNHKGGVIKYKPDEPGYIFCITSITPRVDYYQGNDWDLEIETLDDLHKPQLDGIGFQD  462
             T   KGG IK K  EP +I  I SITPR+DY QGN++  E++T+DD+HKP LDGIG+QD
Sbjct  470  DTGKQKGGHIKIKVTEPCFIMGIGSITPRIDYSQGNEFYNELKTVDDIHKPALDGIGYQD  529

Query  463  -----RLYKNINSSAKREDLIKSIGKQPAWLDYMTSFNRNYGNFALIENEGWMCLNRVF-  516
                 R + +         +  S GK  AW++YMT+ NR +GNFA+ +NE +M LNR + 
Sbjct  530  SLNWQRAWWDDTRMENNGRIQSSAGKTVAWINYMTNINRTFGNFAINDNEAFMVLNRNYE  589

Query  517  ---------GDIDTYTTYIQPHLYNNIFADTDVAAQNFWVQIAFNVEARRVMSAKVIPNL  567
                       I   TTYI P  +N IFA  ++ A NFWVQ  F+++ RR++SAK IPNL
Sbjct  590  LNPNAGTNETKIADLTTYIDPVKFNYIFAYKNLDAMNFWVQTKFDIKVRRLISAKQIPNL  649


 Score = 60.8 bits (146),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 37/60 (62%), Gaps = 4/60 (7%)

Query  33   EVNPSSLPAYLGYRALSNEIET---PVLTVK-AIPFFGYFDIFKNYYANKQEEYFYTIGG  88
            +VNPS L AYLG +       T   PV   K A+P  GY+DIFKN+YAN QEE FY IG 
Sbjct  136  QVNPSCLLAYLGIKGFGINATTSNAPVTVEKMAVPLIGYYDIFKNFYANTQEENFYIIGA  195



Lambda      K        H        a         alpha
   0.317    0.136    0.403    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 52100204