bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-27_CDS_annotation_glimmer3.pl_2_3

Length=83
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical....  44.7    3e-09
  Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.pr...  43.5    8e-09
  Alpavirinae_Human_feces_A_032_Microviridae_AG0216_putative.VP4      20.4    3.2
  Gokush_Human_feces_C_031_Microviridae_AG0434_hypothetical.prote...  20.4    3.7  
  Alpavirinae_Human_gut_31_037_Microviridae_AG0298_hypothetical.p...  19.6    5.6  


> Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical.protein
Length=127

 Score = 44.7 bits (104),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (58%), Gaps = 1/69 (1%)

Query  12   GLSVTPSDIERLARQGIPVSVPNANSF-YNIDSGLDVPPELKVDADRNTLWETSQASKAR  70
             L +TP  +  +A++GIPVS  N N    N D+  ++ P+ + D D  T WE  +AS+ +
Sbjct  48   NLGLTPQQVAEMAKRGIPVSPMNVNFIDVNGDASWNIEPQFRRDMDMATAWEMEKASQRK  107

Query  71   IMKARKRER  79
             ++  ++++
Sbjct  108  ALQVLRQKK  116


> Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.protein
Length=107

 Score = 43.5 bits (101),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 21/68 (31%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query  13  LSVTPSDIERLARQGIPVSVPNANSF-YNIDSGLDVPPELKVDADRNTLWETSQASKARI  71
           L +TP  +  +A++GIPVS  N N    N D+  ++ P+   D D  T WE  +AS+ + 
Sbjct  29  LGLTPQQVAEMAKRGIPVSPMNVNFIDVNGDASWNIEPQFCRDMDMATAWEMEKASQRKA  88

Query  72  MKARKRER  79
           ++  ++++
Sbjct  89  LQVLRQKK  96


> Alpavirinae_Human_feces_A_032_Microviridae_AG0216_putative.VP4
Length=314

 Score = 20.4 bits (41),  Expect = 3.2, Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query  39   YNIDSGLDVP------PELKVDADRNTLWETSQASKARIMKARKRERDHL  82
            Y +++G ++P       ++  + +R  LW   Q    R +   K   D+L
Sbjct  217  YKLENGRELPLPKYYHDKIYTEEEREKLWIIKQERGYRYIAGEKVSTDNL  266


> Gokush_Human_feces_C_031_Microviridae_AG0434_hypothetical.protein.BACEGG.02723
Length=206

 Score = 20.4 bits (41),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 8/31 (26%), Positives = 14/31 (45%), Gaps = 0/31 (0%)

Query  36   NSFYNIDSGLDVPPELKVDADRNTLWETSQA  66
            NS    D+GL     +  D+  N +W  ++ 
Sbjct  103  NSALQADAGLKRAQSVAADSSSNLMWSQTKG  133


> Alpavirinae_Human_gut_31_037_Microviridae_AG0298_hypothetical.protein
Length=115

 Score = 19.6 bits (39),  Expect = 5.6, Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 16/35 (46%), Gaps = 3/35 (9%)

Query  47  VPPELKVDADRNTLWETSQASKARIMKARKRERDH  81
           V P   +  DR   WE +Q +    MKA   +R H
Sbjct  55  VLPAYDIRTDR---WEIAQKAMEENMKAISAKRKH  86



Lambda      K        H        a         alpha
   0.311    0.127    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3643771