bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-30_CDS_annotation_glimmer3.pl_2_2

Length=98
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_B_021_Microviridae_AG0369_hypothetical....  20.8    2.9  
  Gokush_Human_gut_33_023_Microviridae_AG0365_putative.VP3            20.8    3.4
  Gokush_Bourget_309_Microviridae_AG0288_putative.VP1                 20.8    4.0
  Gokush_68_Microbialite_003_Microviridae_AG0157_putative.VP4         20.4    4.5


> Alpavirinae_Human_feces_B_021_Microviridae_AG0369_hypothetical.protein
Length=93

 Score = 20.8 bits (42),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 17/37 (46%), Gaps = 1/37 (3%)

Query  11  PAYVSRGQRIMSVLDGSGSVDV-LPGRPDVVVEPSDF  46
           P Y  R  R    LD    +D+    R ++ V+P DF
Sbjct  43  PEYNIRTDRWDIALDAMNKIDMSRKARKEIDVKPEDF  79


> Gokush_Human_gut_33_023_Microviridae_AG0365_putative.VP3
Length=153

 Score = 20.8 bits (42),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 10/19 (53%), Positives = 13/19 (68%), Gaps = 0/19 (0%)

Query  26   GSGSVDVLPGRPDVVVEPS  44
            GSG  ++ PGR D +V PS
Sbjct  131  GSGIHNLDPGRSDDLVPPS  149


> Gokush_Bourget_309_Microviridae_AG0288_putative.VP1
Length=536

 Score = 20.8 bits (42),  Expect = 4.0, Method: Composition-based stats.
 Identities = 7/16 (44%), Positives = 10/16 (63%), Gaps = 0/16 (0%)

Query  22   SVLDGSGSVDVLPGRP  37
            ++L  SG+  V PG P
Sbjct  248  AILSASGTTQVAPGTP  263


> Gokush_68_Microbialite_003_Microviridae_AG0157_putative.VP4
Length=337

 Score = 20.4 bits (41),  Expect = 4.5, Method: Composition-based stats.
 Identities = 16/56 (29%), Positives = 24/56 (43%), Gaps = 5/56 (9%)

Query  36   RPDVVVEPSDFDKGEKFNPEIEFDPNSFSRMDKFDGLEVGQELIDSEIARSKAASK  91
            RP   +     D GEK      ++    +++ K   LE G   IDS    ++ ASK
Sbjct  155  RPKDSIYKYSTDAGEKV-----YESEELAKIWKKGNLEYGSVTIDSAGYVARYASK  205



Lambda      K        H        a         alpha
   0.311    0.132    0.369    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 4840122