bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-35_CDS_annotation_glimmer3.pl_2_2
Length=177
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 70.5 3e-17
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 52.0 6e-11
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 46.2 3e-09
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 32.0 3e-04
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 32.0 4e-04
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 32.3 0.001
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 70.5 bits (171), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 72/114 (63%), Gaps = 3/114 (3%)
Query 41 DNVDLFRIEQVEHTDSAESYIRVRSDISMLFHAEDTAKKIGTEGFRFLAESRRIKSSSTQ 100
D+ + R+E ++ TD++ +R SDI ++ H +D A + G + +S++ S Q
Sbjct 44 DSTEQLRVE-IDDTDASRP-VRYTSDIRLILHNKDLASRAGVDVASKFGQSKQ-SPSQIQ 100
Query 101 SIMDKMPDDLILDTLKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYVESQTVK 154
IMD M D+ +L T++SR++Q PSE+LA+S++LS+ A ++E + + +E++ K
Sbjct 101 QIMDTMSDEDLLATVRSRYIQSPSEILAWSKELSAYAENLESQAQELIEAENAK 154
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 52.0 bits (123), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/114 (32%), Positives = 57/114 (50%), Gaps = 4/114 (4%)
Query 48 IEQVEHTDSAESYIRVRSDISMLFHAEDTAKKIGTEGFRFLAESRRIKSSSTQSIMDKMP 107
+E + + + IR SD+++L +AE +IG E + L + K S +K
Sbjct 33 VEMLRYVKDDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKKSPYD---NKYT 89
Query 108 DDLILDTLKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYVES-QTVKNNEETS 160
D+ + +KSR +Q PSE+LA+ E L S + E A ES QT + +E T
Sbjct 90 DEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSELDALTESVQTNQQSEATG 143
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 46.2 bits (108), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 20/47 (43%), Positives = 35/47 (74%), Gaps = 0/47 (0%)
Query 103 MDKMPDDLILDTLKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYVE 149
MD M DD +L T++SRH+Q PSE++A+S++LS+ A +E + + ++
Sbjct 1 MDTMSDDDLLATVRSRHIQAPSEIIAWSKELSAYAEHLESQAQELID 47
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 32.0 bits (71), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/37 (41%), Positives = 24/37 (65%), Gaps = 0/37 (0%)
Query 112 LDTLKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYV 148
++T+KSR+LQ PSE+ A+ E L A + +Y+ V
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDKADVVRSDYETIV 37
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 32.0 bits (71), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 14/36 (39%), Positives = 26/36 (72%), Gaps = 0/36 (0%)
Query 115 LKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYVES 150
+K R++Q +EL A+SE L+ A +++ EY+ Y+E+
Sbjct 4 IKPRNVQSHAELKAWSEFLTDKAKEIQTEYETYIEN 39
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 32.3 bits (72), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/52 (31%), Positives = 29/52 (56%), Gaps = 0/52 (0%)
Query 108 DDLILDTLKSRHLQHPSELLAFSEQLSSMASDMEEEYKAYVESQTVKNNEET 159
DD +LD K R++Q +E+ ++ + L S +E + +AY +S + E T
Sbjct 142 DDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYADSLSASVVEPT 193
Lambda K H a alpha
0.315 0.129 0.357 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 12678624