bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-3_CDS_annotation_glimmer3.pl_2_4
Length=67
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr... 75.1 4e-21
Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p... 65.5 2e-17
Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.... 58.2 1e-14
Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.... 57.4 3e-14
Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p... 57.0 5e-14
Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.... 55.8 1e-13
Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.... 28.9 6e-04
Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 21.6 0.86
Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 20.8 1.7
Microvirus_gi|242346743|ref|YP_002985205.1|_gpA*_[Enterobacteri... 20.4 2.0
> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52
Score = 75.1 bits (183), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 37/54 (69%), Positives = 45/54 (83%), Gaps = 2/54 (4%)
Query 14 LISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTRIDVQPNF 67
+I+TFIIG+ITAL + SCTASMSVFWKN NS Q+SQQTT+Q VDS I+ P+F
Sbjct 1 MIATFIIGVITALTVQSCTASMSVFWKNQNSKQDSQQTTQQKVDSVTIN--PHF 52
> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64
Score = 65.5 bits (158), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 28/55 (51%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 8 WIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTRID 62
W E++++I T + L+TAL SCTA+MSVFWKN+NS Q+S+Q+T +DS +I+
Sbjct 6 WKEIIRIIVTVLTALLTALGAQSCTATMSVFWKNANSQQKSEQSTTSKIDSIKIE 60
> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67
Score = 58.2 bits (139), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (75%), Gaps = 0/67 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+ SCT S+SV N NS Q+++QT+ SVDST+
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTK 60
Query 61 IDVQPNF 67
I++ P +
Sbjct 61 ININPKY 67
> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68
Score = 57.4 bits (137), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/65 (54%), Positives = 50/65 (77%), Gaps = 0/65 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+ SCT S+SV N+N++Q+++QTT SVDST
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTTTSSVDSTH 60
Query 61 IDVQP 65
I++ P
Sbjct 61 ININP 65
> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68
Score = 57.0 bits (136), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 51/65 (78%), Gaps = 0/65 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+ SCT S+SV N+N++Q+++QT+ S+DST+
Sbjct 1 MKITGNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTSTSSIDSTK 60
Query 61 IDVQP 65
I++ P
Sbjct 61 ININP 65
> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65
Score = 55.8 bits (133), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/63 (56%), Positives = 49/63 (78%), Gaps = 0/63 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+ SCT S+SV NSNS Q+++QT+ SVDST+
Sbjct 1 MKITSNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTK 60
Query 61 IDV 63
I++
Sbjct 61 INI 63
> Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.protein
Length=66
Score = 28.9 bits (63), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (54%), Gaps = 2/56 (4%)
Query 13 KLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQ--TTRQSVDSTRIDVQPN 66
KL+ ++ I A + C S+++ NSNS+Q+ Q + Q DST +++ N
Sbjct 11 KLMRLVMLAWIIAATLGGCVISLNIQKNNSNSDQKVDQNASANQENDSTNFNIKSN 66
> Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1
Length=573
Score = 21.6 bits (44), Expect = 0.86, Method: Composition-based stats.
Identities = 13/45 (29%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query 1 MKITPQQWIEVVKLIST--FIIGLITALCIHSCTASMSVFWKNSN 43
M +TP K + FIIG++ HS + FW S+
Sbjct 403 MSVTPINESSFTKSLEEHGFIIGVLCVRHDHSYQQGLERFWSRSD 447
> Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1
Length=470
Score = 20.8 bits (42), Expect = 1.7, Method: Composition-based stats.
Identities = 8/26 (31%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 18 FIIGLITALCIHSCTASMSVFWKNSN 43
FIIG++ A H+ + FW +
Sbjct 316 FIIGVMVARYDHTYQQGLERFWSRKD 341
> Microvirus_gi|242346743|ref|YP_002985205.1|_gpA*_[Enterobacteria_phage_St-1]
Length=323
Score = 20.4 bits (41), Expect = 2.0, Method: Composition-based stats.
Identities = 9/22 (41%), Positives = 14/22 (64%), Gaps = 0/22 (0%)
Query 29 HSCTASMSVFWKNSNSNQESQQ 50
S ASM+V KN + + E++Q
Sbjct 279 QSSIASMTVTLKNGDISDEARQ 300
Lambda K H a alpha
0.319 0.126 0.376 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3642139