bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_7

Length=68
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Microvirus_gi|89888655|ref|YP_512416.1|_gpF_[Enterobacteria_pha...  19.6    5.1
  Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1      18.9    8.4


> Microvirus_gi|89888655|ref|YP_512416.1|_gpF_[Enterobacteria_phage_WA13_sensu_lato]
Length=427

 Score = 19.6 bits (39),  Expect = 5.1, Method: Compositional matrix adjust.
 Identities = 7/17 (41%), Positives = 10/17 (59%), Gaps = 0/17 (0%)

Query  45  YGSSQETFLVQHIDSAP  61
           YG     F+ Q +D+AP
Sbjct  78  YGEQWIDFMKQGVDAAP  94


> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651

 Score = 18.9 bits (37),  Expect = 8.4, Method: Composition-based stats.
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 0/12 (0%)

Query  45   YGSSQETFLVQH  56
            Y  +QET LV+H
Sbjct  543  YTGAQETNLVKH  554



Lambda      K        H        a         alpha
   0.321    0.135    0.373    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3625464