bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-41_CDS_annotation_glimmer3.pl_2_1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1 140 2e-41
Alpavirinae_Human_gut_24_085_Microviridae_AG0230_putative.VP1 127 1e-36
Alpavirinae_Human_gut_32_015_Microviridae_AG0213_putative.VP1 127 1e-36
Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1 127 2e-36
Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1 122 1e-34
Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1 121 2e-34
Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1 120 6e-34
Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1 119 8e-34
Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1 119 1e-33
Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1 118 3e-33
> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651
Score = 140 bits (354), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (69%), Gaps = 6/137 (4%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHE--LVYQSLGKQPSWIEYTTDVNETYG 58
+DD HKP LD IG+Q+ + A W TG E LV + GK +WI+Y T+VN+TYG
Sbjct 515 LDDMHKPALDGIGYQDSVNTGRAWWDDVYTGAQETNLVKHTAGKTVAWIDYMTNVNKTYG 574
Query 59 DFAAGMPLAFMCLNRVYE----ENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVA 114
+FAAGM AFM LNR YE ++ IA+ +TYIDP YN IFA++ + + NFWVQ+
Sbjct 575 NFAAGMSEAFMVLNRNYEIKYDSGTNPRIADLTTYIDPIKYNYIFADTSIDAMNFWVQIK 634
Query 115 FDVTARRVMSAKQIPNL 131
FD+TARR+MSAKQIPNL
Sbjct 635 FDITARRLMSAKQIPNL 651
> Alpavirinae_Human_gut_24_085_Microviridae_AG0230_putative.VP1
Length=653
Score = 127 bits (319), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 89/133 (67%), Gaps = 2/133 (2%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDDFHKP D IGF++ + E+ A W+ E ++ GK +WI Y T+ N+T+G+F
Sbjct 521 MDDFHKPAFDGIGFEDSMNEQRAYWTAEYNNGEKISDTKAGKTVAWINYMTNFNKTFGEF 580
Query 61 AAGMPLAFMCLNRVYE--ENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVT 118
AAG FM +NR YE E +D I++ STYIDP+ YN+IFA+ LS+QNFWVQ A +
Sbjct 581 AAGESEDFMVMNRNYERDEENDSLISDLSTYIDPSKYNQIFADESLSAQNFWVQTAVQME 640
Query 119 ARRVMSAKQIPNL 131
RR +SAKQIPNL
Sbjct 641 VRRNISAKQIPNL 653
> Alpavirinae_Human_gut_32_015_Microviridae_AG0213_putative.VP1
Length=653
Score = 127 bits (319), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 90/133 (68%), Gaps = 2/133 (2%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDDFHKP D IGF++ + E+ A W+ E + ++ GK +WI Y T+ N+T+G+F
Sbjct 521 MDDFHKPAFDGIGFEDSMNEQRAYWTAEYSDGEKISDTKAGKTVAWINYMTNFNKTFGEF 580
Query 61 AAGMPLAFMCLNRVYE--ENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVT 118
AAG FM +NR YE E+ D I++ STYIDP+ YN+IFA+ LS+QNFWVQ A +
Sbjct 581 AAGESEDFMVMNRNYERDEDDDSLISDLSTYIDPSKYNQIFADVSLSAQNFWVQTAAQIE 640
Query 119 ARRVMSAKQIPNL 131
RR +SAKQIPNL
Sbjct 641 VRRNISAKQIPNL 653
> Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1
Length=679
Score = 127 bits (319), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 86/131 (66%), Gaps = 10/131 (8%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
+DD HKP LD IGFQ+ + + E + S+GKQP+W++Y T+VN+TYG+F
Sbjct 559 LDDLHKPQLDGIGFQDRLYRHLNSSCV-----REDLNISIGKQPAWVQYMTNVNKTYGNF 613
Query 61 AAGMPLAFMCLNRVYEENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVTAR 120
A +MCLNR++E +T TYI P +YN IFA++ L++QNFWVQ+AF+ R
Sbjct 614 ALVENEGWMCLNRIFENTDTYT-----TYIQPHLYNNIFADTDLTAQNFWVQIAFNYKPR 668
Query 121 RVMSAKQIPNL 131
RVMSAK IPN+
Sbjct 669 RVMSAKIIPNI 679
> Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1
Length=657
Score = 122 bits (306), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 61/130 (47%), Positives = 84/130 (65%), Gaps = 9/130 (7%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDD HKP LD IG+Q+L++ + + ++GKQP+W+ Y TDVN+TY DF
Sbjct 534 MDDLHKPQLDGIGYQDLLSNQMNGLANPT--------DAIGKQPAWLNYMTDVNKTYADF 585
Query 61 AAGMPLAFMCLNRVYEENSD-HTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVTA 119
AAG ++M LNR+Y+ N + TI N STYI P Y IFA + ++++FWVQ+ + A
Sbjct 586 AAGETESYMVLNRIYDVNEETGTIINPSTYISPKDYTYIFATNTDTNRDFWVQIGKKIIA 645
Query 120 RRVMSAKQIP 129
RRVMSA QIP
Sbjct 646 RRVMSAAQIP 655
> Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1
Length=668
Score = 121 bits (304), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/140 (49%), Positives = 86/140 (61%), Gaps = 17/140 (12%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDD HKP LD+IG+Q+L+ E+ A ++ ++GKQPSWI Y T N+TYG F
Sbjct 537 MDDIHKPQLDSIGYQDLMQEQMNAQASRNL--------AVGKQPSWINYMTSFNKTYGTF 588
Query 61 AA--GMPLAFMCLNRVYE-------ENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWV 111
A G AFM LNR ++ + + N STYIDP+ YN IFAE+ S NFWV
Sbjct 589 ANEDGEGEAFMVLNRYFDIKEIDAGTETGVKVYNTSTYIDPSQYNYIFAETGTKSMNFWV 648
Query 112 QVAFDVTARRVMSAKQIPNL 131
Q+ F + ARRVMSA QIPNL
Sbjct 649 QLGFGIEARRVMSASQIPNL 668
> Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1
Length=640
Score = 120 bits (300), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/138 (48%), Positives = 85/138 (62%), Gaps = 7/138 (5%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDD HKP LD IG+Q+ I E A W+ + + + GK +WI Y T+VN TYG+F
Sbjct 503 MDDLHKPALDGIGYQDSINSERAWWAGYYNADPDKKETAAGKTVAWINYMTNVNRTYGNF 562
Query 61 AAGMPLAFMCLNRVYEEN-------SDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQV 113
A AFM +NR YE + TI + STYIDP +N IFA++ L + NFWVQ
Sbjct 563 AIKDNEAFMVMNRNYELEITGGSTPTKITIGDLSTYIDPAKFNYIFADTSLEAMNFWVQT 622
Query 114 AFDVTARRVMSAKQIPNL 131
FD+ ARR++SAKQIPNL
Sbjct 623 KFDIKARRLISAKQIPNL 640
> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650
Score = 119 bits (299), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 62/136 (46%), Positives = 86/136 (63%), Gaps = 5/136 (4%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
+DD HKP LD IG+Q+ + + A W ++ + S GK +WI Y T++N T+G+F
Sbjct 515 VDDIHKPALDGIGYQDSLNWQRAWWDDTRMQDNGRIQSSAGKTVAWINYMTNINRTFGNF 574
Query 61 AAGMPLAFMCLNRVYEEN-----SDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAF 115
A AFM LNR YE N ++ IA+ +TYIDP +N IFA++ L + NFWVQ F
Sbjct 575 AINDNEAFMVLNRNYELNPNAGTNETKIADLTTYIDPVKFNYIFADTNLDAMNFWVQTKF 634
Query 116 DVTARRVMSAKQIPNL 131
D+ RR++SAKQIPNL
Sbjct 635 DIKVRRLISAKQIPNL 650
> Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1
Length=649
Score = 119 bits (298), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (62%), Gaps = 5/136 (4%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
+DD HKP LD IG+Q+ + + A W N+ + S GK +WI Y T++N T+G+F
Sbjct 514 VDDIHKPALDGIGYQDSLNWQRAWWDDTRMENNGRIQSSAGKTVAWINYMTNINRTFGNF 573
Query 61 AAGMPLAFMCLNRVYEEN-----SDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAF 115
A AFM LNR YE N ++ IA+ +TYIDP +N IFA L + NFWVQ F
Sbjct 574 AINDNEAFMVLNRNYELNPNAGTNETKIADLTTYIDPVKFNYIFAYKNLDAMNFWVQTKF 633
Query 116 DVTARRVMSAKQIPNL 131
D+ RR++SAKQIPNL
Sbjct 634 DIKVRRLISAKQIPNL 649
> Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1
Length=657
Score = 118 bits (296), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 85/131 (65%), Gaps = 1/131 (1%)
Query 1 MDDFHKPTLDAIGFQELIaeeaaawsteatGNHELVYQSLGKQPSWIEYTTDVNETYGDF 60
MDD HKP LD IG+Q+L+ E+ A W+ G ++ + GK +WI+Y T+ N T+G+F
Sbjct 528 MDDLHKPALDGIGYQDLMNEQRAWWTATQNGT-KITDTTPGKSVAWIDYMTNFNRTFGNF 586
Query 61 AAGMPLAFMCLNRVYEENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVTAR 120
A G FM LNR YE++ I+N STYI+P + IFA++ L SQNFW+Q A ++T R
Sbjct 587 ATGESEDFMVLNRNYEDDEADGISNGSTYINPQEHIDIFADTALDSQNFWIQTACEITRR 646
Query 121 RVMSAKQIPNL 131
SAKQIPN
Sbjct 647 GNYSAKQIPNF 657
Lambda K H a alpha
0.319 0.133 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 8018811