bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-6_CDS_annotation_glimmer3.pl_2_4
Length=156
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 47.8 2e-09
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 47.4 3e-09
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 38.9 9e-07
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 40.4 2e-06
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 32.3 3e-04
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 28.9 0.004
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 26.2 0.030
Gokush_gi|12085142|ref|NP_073544.1|_minor_capsid_protein_[Bdell... 24.6 0.27
Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1 25.0 0.32
Gokush_Human_gut_35_025_Microviridae_AG0361_putative.VP1 25.0 0.32
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 47.8 bits (112), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query 16 PSPVSAKDMLCSEFRQESPIDQFLFEEFEFDGVKSVRLTSDIYMLFNQQrldrlsresll 75
P+ +A+ + + + Q P++ + + + DGV +R SD+ +L N +RL E
Sbjct 14 PALDTARVLKSAIYCQVGPVEMLRYVKDD-DGV--IRYVSDVNLLMNAERLRNQIGEESY 70
Query 76 sHFESMSVNEPKFGDLRAKLGDDQLISFVKSRFIQSPSELMAWSQYLMSSSD 127
+ + +PK K D+QL + +KSRFIQ+PSE++AW + L S+ D
Sbjct 71 LNL--IRGIQPKKSPYDNKYTDEQLFTAIKSRFIQTPSEVLAWIESLGSAGD 120
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 47.4 bits (111), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 0/87 (0%)
Query 36 DQFLFEEFEFDGVKSVRLTSDIYMLFNQQrldrlsresllsHFESMSVNEPKFGDLRAKL 95
+Q E + D + VR TSDI ++ + + L + + S F + + + +
Sbjct 47 EQLRVEIDDTDASRPVRYTSDIRLILHNKDLASRAGVDVASKFGQSKQSPSQIQQIMDTM 106
Query 96 GDDQLISFVKSRFIQSPSELMAWSQYL 122
D+ L++ V+SR+IQSPSE++AWS+ L
Sbjct 107 SDEDLLATVRSRYIQSPSEILAWSKEL 133
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 38.9 bits (89), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 15/28 (54%), Positives = 23/28 (82%), Gaps = 0/28 (0%)
Query 95 LGDDQLISFVKSRFIQSPSELMAWSQYL 122
+ DD L++ V+SR IQ+PSE++AWS+ L
Sbjct 4 MSDDDLLATVRSRHIQAPSEIIAWSKEL 31
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 40.4 bits (93), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (7%)
Query 33 SPIDQFLFEEFEFDGVKSVRLTSDIYMLFNQQrldrlsresllsHFESMSVNEPKFGDLR 92
+P+ FLF+ DG SV SD +LF Q+ +D +++ L + S+ P+ +
Sbjct 84 NPVGDFLFDH-NADG--SVTFCSDYGILFGQKAIDNMNQVQLRRYMNSLV---PRSSNYT 137
Query 93 AKLGDDQLISFVKSRFIQSPSELMAWSQYLMS 124
DD L+ + K R IQS +E+ +W +L+S
Sbjct 138 RNYNDDFLLDYCKDRNIQSATEMASWLDHLLS 169
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 32.3 bits (72), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 0/24 (0%)
Query 104 VKSRFIQSPSELMAWSQYLMSSSD 127
+KSR++QSPSE+ AW + L+ +D
Sbjct 4 IKSRYLQSPSEVRAWLETLVDKAD 27
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 28.9 bits (63), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 0/22 (0%)
Query 101 ISFVKSRFIQSPSELMAWSQYL 122
+S +K R +QS +EL AWS++L
Sbjct 1 MSLIKPRNVQSHAELKAWSEFL 22
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 26.2 bits (56), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 10/24 (42%), Positives = 17/24 (71%), Gaps = 0/24 (0%)
Query 101 ISFVKSRFIQSPSELMAWSQYLMS 124
+ + K R IQS +E+ AW ++L+S
Sbjct 1 MEYCKDRNIQSYTEMQAWLEHLIS 24
> Gokush_gi|12085142|ref|NP_073544.1|_minor_capsid_protein_[Bdellovibrio_phage_phiMH2K]
Length=151
Score = 24.6 bits (52), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/29 (38%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 92 RAKLGDDQLISFVKSRFIQSPSELMAWSQ 120
+A+ D+L + ++ RF SP ELM + Q
Sbjct 75 KAQQAFDELPAHMRKRFANSPHELMQFLQ 103
> Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1
Length=582
Score = 25.0 bits (53), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/31 (39%), Positives = 20/31 (65%), Gaps = 1/31 (3%)
Query 7 IEPYVTPVNPSPVSAKDMLCSE-FRQESPID 36
++P TP+N P A +++ +E FR E+ ID
Sbjct 140 LDPANTPINALPFRAYNLIYNEWFRDENLID 170
> Gokush_Human_gut_35_025_Microviridae_AG0361_putative.VP1
Length=582
Score = 25.0 bits (53), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/31 (39%), Positives = 20/31 (65%), Gaps = 1/31 (3%)
Query 7 IEPYVTPVNPSPVSAKDMLCSE-FRQESPID 36
++P TP+N P A +++ +E FR E+ ID
Sbjct 140 LDPANTPINALPFRAYNLIYNEWFRDENLID 170
Lambda K H a alpha
0.320 0.133 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10508354