bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-6_CDS_annotation_glimmer3.pl_2_6
Length=94
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 33.9 9e-05
Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4 33.1 1e-04
Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4 28.9 0.005
Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4 28.1 0.011
Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4 24.6 0.14
Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4 24.6 0.15
Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4 24.6 0.18
Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4 24.3 0.22
Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4 23.9 0.29
Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4 22.7 0.70
> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565
Score = 33.9 bits (76), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (11%)
Query 2 IEEFYSYLDYMHLTTFFESQQEFYESDLIGDDDLCTDQWENSYYPYFY-YNVHTNE-PFE 59
I F++ DYM L F+++ ++ + +L+ +E Y + Y +V E P+
Sbjct 478 IVVFWNRYDYMRLVDFYQTLEDSNDKELV--------DFEIRNYSFCYNRSVRDKEKPYH 529
Query 60 KTPVYRLYASDVKKLFNDRIKHKKLNDANKIF 91
+ P+ R A+ D++KHKK+ND IF
Sbjct 530 ELPLVRRLAAASLMKCRDKVKHKKINDMFGIF 561
> Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4
Length=562
Score = 33.1 bits (74), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/93 (27%), Positives = 48/93 (52%), Gaps = 10/93 (11%)
Query 2 IEEFYSYLDYMHLTTFFESQQEFYESDLIGDDDLCTDQWENSYYPYFY-YNVHTNE-PFE 59
I F++ +Y L F+++ ++ + +L+ +E Y + Y +V NE P+
Sbjct 478 IVNFWNRYEYNRLVDFYQTLEDSNDKELV--------DFELRNYSFRYNRSVRDNERPYN 529
Query 60 KTPVYRLYASDVKKLFNDRIKHKKLNDANKIFI 92
+ P+ R A+ D++KHKK+ND + IF+
Sbjct 530 ELPLVRRLAAASLMKCRDKVKHKKVNDLSGIFL 562
> Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4
Length=559
Score = 28.9 bits (63), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 13/15 (87%), Gaps = 0/15 (0%)
Query 77 DRIKHKKLNDANKIF 91
D IKHK+LNDAN IF
Sbjct 541 DMIKHKRLNDANNIF 555
> Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4
Length=539
Score = 28.1 bits (61), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query 67 YASDVKKLFNDRIKHKKLNDANKIFIDE 94
YA+D + +RIKHK LND N + I E
Sbjct 510 YAADNR----ERIKHKALNDKNSLLIAE 533
> Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4
Length=532
Score = 24.6 bits (52), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Query 69 SDVKKLFNDRIKHKKLNDANKIFIDE 94
S+++K RIKH+++NDA IF +
Sbjct 503 SEIRK----RIKHREINDAVGIFTKQ 524
> Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4
Length=563
Score = 24.6 bits (52), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 0/15 (0%)
Query 78 RIKHKKLNDANKIFI 92
R+KHK LND N +F+
Sbjct 549 RVKHKVLNDQNDVFL 563
> Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4
Length=532
Score = 24.6 bits (52), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query 73 KLFND---RIKHKKLNDANKIFIDE 94
KL N+ RIKH+++NDA IF +
Sbjct 500 KLHNEIRKRIKHREINDAVGIFTKQ 524
> Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4
Length=536
Score = 24.3 bits (51), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/17 (65%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
Query 78 RIKHKKLNDANKIFIDE 94
RIKHK LND N I E
Sbjct 516 RIKHKYLNDLNCALIAE 532
> Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4
Length=611
Score = 23.9 bits (50), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 7/25 (28%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
Query 68 ASDVKKLFNDRIKHKKLNDANKIFI 92
+ +K+ D++KHK+ ND + +
Sbjct 584 TARTEKVLKDKVKHKEFNDMQGVLL 608
> Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4
Length=547
Score = 22.7 bits (47), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 0/15 (0%)
Query 79 IKHKKLNDANKIFID 93
IKHK+LND N F++
Sbjct 532 IKHKELNDLNYCFLN 546
Lambda K H a alpha
0.320 0.139 0.428 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4379158