bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-7_CDS_annotation_glimmer3.pl_2_8
Length=184
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4 362 2e-125
Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4 207 2e-65
Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4 29.3 0.020
Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4 29.3 0.020
Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4 24.6 0.61
Gokush_Human_feces_E_007_Microviridae_AG0411_hypothetical.protein 22.7 1.2
Alpavirinae_Human_feces_D_022_Microviridae_AG0389_putative.VP4 22.7 2.2
Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4 22.7 2.2
Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 21.9 4.1
Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1 21.9 4.2
> Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4
Length=536
Score = 362 bits (930), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 174/184 (95%), Positives = 180/184 (98%), Gaps = 0/184 (0%)
Query 1 VTLFEQAKRTFFVIKKYLQVDHSLDNAPEALRFIYNACRLSLYLNFSELEGCSAVYRLFL 60
VTLFEQAKRTFFVIKKYLQVDHSLDNAPE LRFIYNACRLSLYLNFSELEGCSAVYRLFL
Sbjct 353 VTLFEQAKRTFFVIKKYLQVDHSLDNAPETLRFIYNACRLSLYLNFSELEGCSAVYRLFL 412
Query 61 AYRNLCDHWITVPSNHIAFYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQNNYLST 120
AYRNLCDHWITVPSNHIAFYGQLR+AFRTIYAFYSYMDSK+LHDQL+KV+SWSQNNYLST
Sbjct 413 AYRNLCDHWITVPSNHIAFYGQLRKAFRTIYAFYSYMDSKYLHDQLVKVQSWSQNNYLST 472
Query 121 QVDFRYFYPLTDGELMCNSYREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLIAE 180
QVDFRYFYPLTDGELM +SYREVLALS FCRAAYAEVAADNRQRIKHKYLNDLNC LIAE
Sbjct 473 QVDFRYFYPLTDGELMRSSYREVLALSSFCRAAYAEVAADNRQRIKHKYLNDLNCALIAE 532
Query 181 CDRH 184
CD+H
Sbjct 533 CDKH 536
> Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4
Length=539
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 133/183 (73%), Gaps = 0/183 (0%)
Query 1 VTLFEQAKRTFFVIKKYLQVDHSLDNAPEALRFIYNACRLSLYLNFSELEGCSAVYRLFL 60
V+ FE +KR +++I+++L+VD SLD A + LR IYNACRLSLY+NFS+ GC+A+YRL L
Sbjct 354 VSDFELSKRVYYLIRRHLEVDCSLDYASDELRVIYNACRLSLYINFSDESGCAAIYRLLL 413
Query 61 AYRNLCDHWITVPSNHIAFYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQNNYLST 120
YRNL +WIT P +AF GQL RA R I++FY Y + LHDQL+KV WS ++Y+
Sbjct 414 QYRNLVKNWITAPVGSVAFTGQLHRAVRAIHSFYDYCSRRSLHDQLVKVEKWSNDSYVRA 473
Query 121 QVDFRYFYPLTDGELMCNSYREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLIAE 180
+ YFYPLTD ++M S+ E++ S RA+YA+ AADNR+RIKHK LND N +LIAE
Sbjct 474 NLSIYYFYPLTDVDIMMKSFSEIVFDSQVLRASYADYAADNRERIKHKALNDKNSLLIAE 533
Query 181 CDR 183
D+
Sbjct 534 VDK 536
> Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4
Length=563
Score = 29.3 bits (64), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query 81 GQLRRAFRTIYAFYSYMDSKHLHDQL-LKVRSWSQNNYLSTQVDFRYFYPLTDGELMCNS 139
G R + + FY Y D + L +QL ++ +S+ Y +D FY + +++ N
Sbjct 475 GSFRSKLKAVELFYDYRDYQSLKNQLYMQQLVFSELGYSDELLD--SFYVKPNLKVLKNI 532
Query 140 YREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLI 178
Y E + + Y R+KHK LND N V +
Sbjct 533 YTEKWHDTNYHEVHYF--------RVKHKVLNDQNDVFL 563
> Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4
Length=547
Score = 29.3 bits (64), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query 56 YRLFLAYRNLCDHWITVPSNHIAFYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQN 115
YR+ Y +L W + F ++ A R + +YS + ++L +Q + + +
Sbjct 411 YRIAYNYCSLVRFWTSCDICGFGFDREIELAIRNVNRYYSETEYRYLVNQYEDILRFIDS 470
Query 116 NYLSTQV-DFRYFYPLTDGELMCNSYREVLALSP-----------FCRAAYAEVAADNRQ 163
+ +V D +Y + G + + +++S +A E +
Sbjct 471 EFYRGEVDDLLMYYDRSPGRFVVSKQHRKVSMSDTFPVSTIKTNRLVQAVDEECHCRIQN 530
Query 164 RIKHKYLNDLN 174
IKHK LNDLN
Sbjct 531 SIKHKELNDLN 541
> Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4
Length=562
Score = 24.6 bits (52), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/55 (31%), Positives = 25/55 (45%), Gaps = 7/55 (13%)
Query 124 FRYFYPLTDGELMCNSYREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLI 178
FRY + D E Y E+ P R A R ++KHK +NDL+ + +
Sbjct 515 FRYNRSVRDNE---RPYNEL----PLVRRLAAASLMKCRDKVKHKKVNDLSGIFL 562
> Gokush_Human_feces_E_007_Microviridae_AG0411_hypothetical.protein
Length=80
Score = 22.7 bits (47), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 8/37 (22%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
Query 79 FYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQN 115
Y Q+ ++ I S D+K + D++ ++ W+ +
Sbjct 22 LYKQIEAGYKMIKKVSSSEDAKKIIDRIWIMKKWAND 58
> Alpavirinae_Human_feces_D_022_Microviridae_AG0389_putative.VP4
Length=307
Score = 22.7 bits (47), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (48%), Gaps = 2/46 (4%)
Query 91 YAFYSYMDSKHLHDQLLKVRSWSQNNYLSTQVDFRYFYPL--TDGE 134
YAF + DQLL+ R+ + ++ F YF+ L DG+
Sbjct 91 YAFIRRFIDRMRKDQLLRYRNPDTGRFCYRKISFPYFFVLEVADGK 136
> Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4
Length=611
Score = 22.7 bits (47), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/128 (23%), Positives = 56/128 (44%), Gaps = 13/128 (10%)
Query 59 FLAYRNLCDHW-ITVPSNHIAFYGQ---LRRAFRTIYAFYSYMDSKHLHDQL-LKVRSWS 113
F + D W + V I YG ++ +R + ++ Y++ + ++L L VR+
Sbjct 486 FWNLKQYTDSWSLKVAIKKIWSYGWEYWKKKEYRFLTTYFEYLEGCNDDERLFLLVRT-- 543
Query 114 QNNYLSTQVDFRYFYPLTDGELMCNS---YREVLALSPFCRAAYAEVAADNRQRIKHKYL 170
+ L+T + Y + + C S Y+ + + A +V D ++KHK
Sbjct 544 SGSGLATDSPHSWTYTQREDYVNCLSDDFYKRYMNTLKWLTARTEKVLKD---KVKHKEF 600
Query 171 NDLNCVLI 178
ND+ VL+
Sbjct 601 NDMQGVLL 608
Score = 21.2 bits (43), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/19 (53%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 46 FSELEGCSAVYRLFLAYRN 64
F LEGC+ RLFL R
Sbjct 525 FEYLEGCNDDERLFLLVRT 543
> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565
Score = 21.9 bits (45), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/26 (35%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 148 PFCRAAYAEVAADNRQRIKHKYLNDL 173
P R A R ++KHK +ND+
Sbjct 532 PLVRRLAAASLMKCRDKVKHKKINDM 557
> Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1
Length=541
Score = 21.9 bits (45), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 0/15 (0%)
Query 60 LAYRNLCDHWITVPS 74
LAY NL DH+ + P+
Sbjct 474 LAYWNLADHYTSEPT 488
Lambda K H a alpha
0.329 0.139 0.439 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 13457136