bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-13_CDS_annotation_glimmer3.pl_2_3
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
gi|652501311|ref|WP_026895685.1| sulfite reductase subunit A 35.0 4.5
gi|402470239|gb|EJW04594.1| hypothetical protein EDEG_01208 34.7 7.5
gi|515404121|ref|WP_016893253.1| hypothetical protein 34.7 8.2
gi|491214220|ref|WP_005072547.1| hypothetical protein 34.7 8.2
gi|640663744|ref|WP_025089080.1| MULTISPECIES: hypothetical protein 34.3 8.8
gi|643930745|ref|WP_025269302.1| hypothetical protein 34.3 8.8
gi|491228689|ref|WP_005086964.1| hypothetical protein 34.3 8.8
gi|491233862|ref|WP_005092091.1| hypothetical protein 34.3 8.8
gi|640215842|ref|WP_024825176.1| cyclase 34.3 9.3
gi|491225264|ref|WP_005083551.1| hypothetical protein 34.3 9.8
>gi|652501311|ref|WP_026895685.1| sulfite reductase subunit A [Clostridiisalibacter paucivorans]
Length=336
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/37 (41%), Positives = 23/37 (62%), Gaps = 0/37 (0%)
Query 60 RTDRFDIAMDAYDKITRSSAKKEIAPKPEDFGNVPNK 96
RTDR+D+++D YD I R K ++ K D N+P +
Sbjct 150 RTDRYDMSIDQYDDIYRIDCKNKVWQKQLDDMNIPQE 186
>gi|402470239|gb|EJW04594.1| hypothetical protein EDEG_01208 [Edhazardia aedis USNM 41457]
Length=345
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (43%), Gaps = 8/87 (9%)
Query 13 LKSVEIYEGESIETKCARILQNKEPITDTAP--------IIYTAKEDGVLPAYNIRTDRF 64
+K ++I +G I TKC + ++ I P YTAK L YN + R+
Sbjct 121 VKQIDISKGSQIATKCKNVFLDQFIIDSIKPNFAVNENNFFYTAKATSNLFLYNEKEVRY 180
Query 65 DIAMDAYDKITRSSAKKEIAPKPEDFG 91
+I + KI ++ K ++F
Sbjct 181 NIVFIEWRKIEKTENKSHFYNVEKEFN 207
>gi|515404121|ref|WP_016893253.1| hypothetical protein [Mycobacterium abscessus]
Length=442
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|491214220|ref|WP_005072547.1| hypothetical protein [Mycobacterium abscessus]
gi|364001774|gb|EHM22966.1| hypothetical protein MBOL_03310 [Mycobacterium abscessus subsp.
bolletii BD]
Length=442
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|640663744|ref|WP_025089080.1| MULTISPECIES: hypothetical protein [Mycobacterium]
Length=442
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|643930745|ref|WP_025269302.1| hypothetical protein [Mycobacterium abscessus]
gi|576376056|gb|ETZ70163.1| hypothetical protein L835_3076 [Mycobacterium abscessus MAB_110811_1470]
gi|576393530|gb|ETZ87511.1| hypothetical protein L829_1058 [Mycobacterium abscessus MAB_030201_1075]
gi|576397501|gb|ETZ91470.1| hypothetical protein L828_3140 [Mycobacterium abscessus MAB_030201_1061]
Length=442
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|491228689|ref|WP_005086964.1| hypothetical protein [Mycobacterium abscessus]
gi|382946373|gb|EIC70659.1| hypothetical protein S7W_04367 [Mycobacterium abscessus M94]
gi|576453573|gb|EUA47191.1| hypothetical protein I543_0433 [Mycobacterium abscessus 21]
Length=442
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|491233862|ref|WP_005092091.1| hypothetical protein [Mycobacterium abscessus]
gi|169627498|ref|YP_001701147.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|169239465|emb|CAM60493.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|392067573|gb|EIT93421.1| hypothetical protein MA4S0726RB_4767 [Mycobacterium abscessus
4S-0726-RB]
gi|392075126|gb|EIU00960.1| hypothetical protein MA4S0726RA_0273 [Mycobacterium abscessus
4S-0726-RA]
gi|392077371|gb|EIU03202.1| hypothetical protein MA4S0303_0548 [Mycobacterium abscessus 4S-0303]
gi|392115025|gb|EIU40794.1| hypothetical protein MA6G0125R_4566 [Mycobacterium abscessus
6G-0125-R]
gi|392125722|gb|EIU51475.1| hypothetical protein MA6G0125S_0298 [Mycobacterium abscessus
6G-0125-S]
gi|392131146|gb|EIU56892.1| hypothetical protein MA6G0728S_1923 [Mycobacterium abscessus
6G-0728-S]
gi|392147528|gb|EIU73248.1| hypothetical protein MA6G1108_0296 [Mycobacterium abscessus 6G-1108]
gi|392175591|gb|EIV01253.1| hypothetical protein MA6G0212_0361 [Mycobacterium abscessus 6G-0212]
gi|392176644|gb|EIV02302.1| hypothetical protein MA6G0728R_0295 [Mycobacterium abscessus
6G-0728-R]
gi|392184849|gb|EIV10500.1| hypothetical protein MA4S0206_2001 [Mycobacterium abscessus 4S-0206]
gi|392204756|gb|EIV30341.1| hypothetical protein MA3A0119R_0336 [Mycobacterium abscessus
3A-0119-R]
gi|392214884|gb|EIV40433.1| hypothetical protein MA3A0122R_0402 [Mycobacterium abscessus
3A-0122-R]
gi|392217887|gb|EIV43420.1| hypothetical protein MA3A0122S_0156 [Mycobacterium abscessus
3A-0122-S]
gi|392218011|gb|EIV43543.1| hypothetical protein MA3A0731_0337 [Mycobacterium abscessus 3A-0731]
gi|392225979|gb|EIV51493.1| hypothetical protein MA4S0116R_0541 [Mycobacterium abscessus
4S-0116-R]
gi|392232798|gb|EIV58298.1| hypothetical protein MA3A0930S_0346 [Mycobacterium abscessus
3A-0930-S]
gi|392235898|gb|EIV61396.1| hypothetical protein MA4S0116S_4308 [Mycobacterium abscessus
4S-0116-S]
gi|392236492|gb|EIV61988.1| hypothetical protein MA3A0930R_0346 [Mycobacterium abscessus
3A-0930-R]
gi|392258887|gb|EIV84329.1| hypothetical protein MM3A0810R_0345 [Mycobacterium abscessus
3A-0810-R]
gi|528869702|gb|EPZ20995.1| hypothetical protein M879_08645 [Mycobacterium abscessus V06705]
gi|576369741|gb|ETZ63949.1| hypothetical protein L836_5398 [Mycobacterium abscessus MAB_110811_2726]
gi|576470578|gb|EUA64172.1| hypothetical protein I542_4339 [Mycobacterium abscessus 1948]
gi|576479485|gb|EUA73025.1| hypothetical protein I541_5234 [Mycobacterium chelonae 1518]
gi|576488182|gb|EUA81701.1| hypothetical protein I544_3010 [Mycobacterium abscessus 103]
Length=442
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
>gi|640215842|ref|WP_024825176.1| cyclase [Desulfovibrio magneticus]
Length=278
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query 10 NDRLKSVEIYEGESIETKCA-----RILQNKEPITDTAPIIYTAKEDGVLPAYNIRTDRF 64
N K + Y G S+E A +I + TDT P + T K+D L Y +++D +
Sbjct 179 NKDAKGIAHYPGWSLEVLRALYEDRKITASGHETTDTDPGLTTTKDDYSLETYILKSDHY 238
Query 65 DIAMDAYDKITRSSAKKEIA--PKPEDFGNVPNKT 97
I + A+ + +A PKP+D P +
Sbjct 239 QIELLAHLDAVPEAGALVVASFPKPKDGSGFPARV 273
>gi|491225264|ref|WP_005083551.1| hypothetical protein [Mycobacterium abscessus]
gi|382939799|gb|EIC64125.1| hypothetical protein OUW_15282 [Mycobacterium abscessus M93]
Length=442
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (6%)
Query 36 EPITDTAPIIYTAKEDGVLPAYNIRTDR--FDIAMDAYDKITRSSAKKEIAPKPEDFGNV 93
EP+ P + A +G L ++R R FD+ DA D TR +A+K++A +FG
Sbjct 100 EPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFG-- 157
Query 94 PNKTEGGS 101
P + G+
Sbjct 158 PEQLRAGA 165
Lambda K H a alpha
0.309 0.130 0.364 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 432030614547