bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-18_CDS_annotation_glimmer3.pl_2_1
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
gi|547312921|ref|WP_022044633.1| hypothetical protein 115 4e-32
gi|662515762|gb|KEQ73327.1| hypothetical protein M436DRAFT_63642 35.8 0.68
gi|662503988|gb|KEQ61606.1| hypothetical protein M437DRAFT_67069 35.4 0.91
gi|662542411|gb|KEQ99709.1| hypothetical protein AUEXF2481DRAFT_... 34.7 1.4
gi|654814810|ref|WP_028268123.1| hypothetical protein 32.3 7.8
gi|662141062|ref|WP_030092358.1| hypothetical protein 33.1 8.9
gi|661299188|ref|WP_029991987.1| hypothetical protein 33.1 9.1
gi|493161814|ref|WP_006168720.1| transposase 31.2 9.2
gi|500509530|ref|WP_011951189.1| hypothetical protein 33.1 9.4
gi|515115531|ref|WP_016744563.1| hypothetical protein 33.1 9.6
>gi|547312921|ref|WP_022044633.1| hypothetical protein [Alistipes finegoldii CAG:68]
gi|524208441|emb|CCZ76637.1| unknown [Alistipes finegoldii CAG:68]
Length=60
Score = 115 bits (289), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 58/60 (97%), Gaps = 0/60 (0%)
Query 1 METQKEYIIVVNGRPYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAPGKDNGN 60
ME QKEYI+VVNGRPYFSVVDVKHLSAVIDDAKARFGADSKI+V +QTTEPYAPGK+NGN
Sbjct 1 MEIQKEYILVVNGRPYFSVVDVKHLSAVIDDAKARFGADSKIDVFLQTTEPYAPGKNNGN 60
>gi|662515762|gb|KEQ73327.1| hypothetical protein M436DRAFT_63642 [Aureobasidium pullulans
var. namibiae CBS 147.97]
Length=174
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (62%), Gaps = 4/39 (10%)
Query 3 TQKEYIIVVNGRPYFSVVDVKHLSAVIDDAKARFGADSK 41
T+ EY+I+ N RPY HL+A+I+D + RF D +
Sbjct 110 TKSEYLILANQRPYRRT----HLAAMIEDVETRFTIDEQ 144
>gi|662503988|gb|KEQ61606.1| hypothetical protein M437DRAFT_67069 [Aureobasidium melanogenum
CBS 110374]
Length=157
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (65%), Gaps = 4/34 (12%)
Query 3 TQKEYIIVVNGRPYFSVVDVKHLSAVIDDAKARF 36
T+ EY+I+ N RPY HL+A+I+DA RF
Sbjct 93 TKSEYLILANQRPYRRA----HLAAMIEDADTRF 122
>gi|662542411|gb|KEQ99709.1| hypothetical protein AUEXF2481DRAFT_1198 [Aureobasidium subglaciale
EXF-2481]
Length=157
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (62%), Gaps = 4/39 (10%)
Query 3 TQKEYIIVVNGRPYFSVVDVKHLSAVIDDAKARFGADSK 41
T+ EY+++ N RPY HL+A+I+DA RF + +
Sbjct 93 TKSEYLVLANQRPYRR----SHLAAMIEDADTRFTTEEQ 127
>gi|654814810|ref|WP_028268123.1| hypothetical protein [Arthrobacter sp. MA-N2]
Length=133
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/46 (37%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
Query 15 PYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAPGKDNGN 60
P+ V V+ L AV D KAR + +I + T P PGK+ G+
Sbjct 69 PFVQVCPVRDLEAVFDSQKARQARNGEIVEYVYLTMPPVPGKEWGH 114
>gi|662141062|ref|WP_030092358.1| hypothetical protein [Sphingomonas sp. DC-6]
Length=395
Score = 33.1 bits (74), Expect = 8.9, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
Query 15 PYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAP 54
P+F D + ++ I+D +AR AD ++ +V+ +P P
Sbjct 287 PWFQTTDYRFHASSINDKQARRDADGRVRIVLSPRDPGVP 326
>gi|661299188|ref|WP_029991987.1| hypothetical protein [Sphingomonas sp. YL-JM2C]
Length=395
Score = 33.1 bits (74), Expect = 9.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
Query 15 PYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAP 54
P+F D + ++ I+D +AR AD ++ +V+ +P P
Sbjct 287 PWFQTTDYRFHASSINDKQARRDADGRVRIVLSPRDPGVP 326
>gi|493161814|ref|WP_006168720.1| transposase [Natrialba chahannaoensis]
gi|445643072|gb|ELY96127.1| transposase [Natrialba chahannaoensis JCM 10990]
Length=83
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 2 ETQKEYIIVVNGRPYFSVVDVKHLSAVIDDAKARFGADS 40
E + E IIV++G PYF V L+A D A RF A S
Sbjct 34 EFEDELIIVLDGAPYFQASAVTDLAARDDLALVRFPAYS 72
>gi|500509530|ref|WP_011951189.1| hypothetical protein [Sphingomonas wittichii]
gi|148553265|ref|YP_001260847.1| hypothetical protein Swit_0338 [Sphingomonas wittichii RW1]
gi|148498455|gb|ABQ66709.1| hypothetical protein Swit_0338 [Sphingomonas wittichii RW1]
Length=395
Score = 33.1 bits (74), Expect = 9.4, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
Query 15 PYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAP 54
P+F D + ++ I+D +AR AD ++ +V+ +P P
Sbjct 287 PWFQTTDYRFHASSINDKQARRDADGRVRIVLSPRDPGVP 326
>gi|515115531|ref|WP_016744563.1| hypothetical protein [Sphingomonas wittichii]
Length=395
Score = 33.1 bits (74), Expect = 9.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
Query 15 PYFSVVDVKHLSAVIDDAKARFGADSKIEVVMQTTEPYAP 54
P+F D + ++ I+D +AR AD ++ +V+ +P P
Sbjct 287 PWFQTTDYRFHASSINDKQARRDADGRVRIVLSPRDPGVP 326
Lambda K H a alpha
0.314 0.133 0.371 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 430540141590