bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters



Query= Contig-27_CDS_annotation_glimmer3.pl_2_1

Length=197
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|575094324|emb|CDL65715.1|  unnamed protein product                   376   9e-128


>gi|575094324|emb|CDL65715.1| unnamed protein product [uncultured bacterium]
Length=370

 Score =   376 bits (966),  Expect = 9e-128, Method: Compositional matrix adjust.
 Identities = 180/196 (92%), Positives = 189/196 (96%), Gaps = 0/196 (0%)

Query  1    MSGLEVQLTKAQAEYTEGQKSKLISEINDINEHVNLLKAQISETWSRTANLDASTIATRT  60
            +SG+EVQLTKAQAEYT  QK+KLISEINDINEHVNLLKAQISETW+RT+NLD+ST+  RT
Sbjct  174  LSGVEVQLTKAQAEYTSEQKTKLISEINDINEHVNLLKAQISETWARTSNLDSSTVLNRT  233

Query  61   AAILNNRRFDLECEDFARRVRETDAKVNLSEAEAKSILVTMYAKVNNIDTDTALKQANIR  120
             AILNNRRFDLECE+FARRVRETDAKVNLSEAEAKSILVTMYAKVNNID DTALKQANIR
Sbjct  234  TAILNNRRFDLECEEFARRVRETDAKVNLSEAEAKSILVTMYAKVNNIDADTALKQANIR  293

Query  121  LTDAQKTQVEHYTNSIDIHRDAAVFKLQQDQKYDDAQRIVTVANQATQSLYHISQVASDW  180
            LTDAQKTQVEHYTNSIDIHRDAAVFKLQQDQKYDDAQRIV+VANQATQSLYHISQVASDW
Sbjct  294  LTDAQKTQVEHYTNSIDIHRDAAVFKLQQDQKYDDAQRIVSVANQATQSLYHISQVASDW  353

Query  181  LPSPGGIAKKLLRHGK  196
            LPSPGGIAKKLLR GK
Sbjct  354  LPSPGGIAKKLLRSGK  369



Lambda      K        H        a         alpha
   0.313    0.125    0.338    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 609998688603