bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_1
Length=264
Score E
Sequences producing significant alignments: (Bits) Value
gi|444298142|dbj|GAC77768.1| major capsid protein 52.0 1e-04
gi|609718276|emb|CDN73650.1| conserved hypothetical protein 52.4 1e-04
gi|639237429|ref|WP_024568106.1| hypothetical protein 52.0 2e-04
gi|492501782|ref|WP_005867318.1| hypothetical protein 51.6 2e-04
gi|547312923|ref|WP_022044635.1| putative uncharacterized protein 50.8 4e-04
gi|599087433|gb|AHN52642.1| major capsid protein 49.3 0.001
gi|575096056|emb|CDL66947.1| unnamed protein product 48.5 0.002
gi|649557305|gb|KDS63784.1| capsid family protein 47.8 0.003
gi|649569140|gb|KDS75238.1| capsid family protein 46.6 0.010
gi|444297974|dbj|GAC77852.1| major capsid protein 45.4 0.014
>gi|444298142|dbj|GAC77768.1| major capsid protein [uncultured marine virus]
Length=299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 4/146 (3%)
Query 2 AGVQTIPQLAIASRLQEYKDLLGAGGSRYSDWLETF-FASKIEHVDRPKLIFSASQTVNV 60
AG I L A LQ Y++ G+R++++L +S + RP++I + +N
Sbjct 116 AGAININDLREAFALQRYQEARNLYGARFTEYLRYLGISSSXGRLQRPEMISTGKSNINF 175
Query 61 QVIMNQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRP-VYYWAT 119
++N +G + PLG+ GG R Y+ E G++I ++S+RP Y T
Sbjct 176 SEVLNTTGPSGVD-DHPLGEMGGH-GIAGVKSNRARYFCEEHGHIISLMSVRPKTIYMTT 233
Query 120 ITPDYLSYRGADYFNPIYNDIGYQDI 145
+ DY+ IG +++
Sbjct 234 QHKQFDRESKEDYWQKELQAIGMEEV 259
>gi|609718276|emb|CDN73650.1| conserved hypothetical protein [Elizabethkingia anophelis]
Length=537
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (5%)
Query 4 VQTIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFASKIE--HVDRPKLIFSASQTVNVQ 61
V T+ L A +LQE+ + GSRY++ + +FF K + RP+ + + +
Sbjct 288 VSTVNDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSDGRLQRPEFLGGNKSPIMIS 347
Query 62 VIMNQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRPVYYWATIT 121
++ QS ++ + + G I + R +F E GY+I ++S+ P ++
Sbjct 348 EVLQQSATDSTTPQGNMAGHGIGIGKDGGFSR----FFEEHGYVIGLMSVIPKTSYSQGI 403
Query 122 PDYLSYRGA-DYFNPIYNDIGYQDI 145
P + S DYF P + IG Q +
Sbjct 404 PRHFSKSDKFDYFWPQFEHIGEQPV 428
>gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis]
Length=546
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query 2 AGVQTIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFASKIE--HVDRPKLIFSASQTVN 59
A TI L A +LQE+ + GSRY++ + +FF K + RP+ + +
Sbjct 295 ASGSTINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSDGRLQRPEFLGGNKTPIL 354
Query 60 VQVIMNQSGLNNFSGTQPLGQQGG-AIAFNDRLGRRQSYYFREPGYMIDMLSIRPVYYWA 118
+ ++ QS ++ T P G G I+ G S +F E GY+I ++S+ P ++
Sbjct 355 ISEVLQQSSTDS---TTPQGNMAGHGISVGKEGGF--SKFFEEHGYVIGLMSVIPKTSYS 409
Query 119 TITPDYLS-YRGADYFNPIYNDIGYQDI 145
P + S + DYF P + IG Q +
Sbjct 410 QGIPRHFSKFDKFDYFWPQFEHIGEQPV 437
>gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis]
gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis
CL09T03C24]
Length=538
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 9/186 (5%)
Query 6 TIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFA--SKIEHVDRPKLIFSASQTVNVQVI 63
+I L ++ LQ + + GSRY + + + F S + RP+ + ++V +
Sbjct 297 SINDLRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEV 356
Query 64 MNQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRP-VYYWATITP 122
+ S ++ S + G + N R YF E GY+I ++SIRP Y +
Sbjct 357 LQTSATDSTSPQANMAGHGISAGVNHGFKR----YFEEHGYIIGIMSIRPRTGYQQGVPK 412
Query 123 DYLSYRGADYFNPIYNDIGYQDISISRI--ANCPPQIDNVAVQEPCFNEFRASYDEVLGQ 180
D+ + D++ P + +G Q+I + P + P + E++ S +EV G
Sbjct 413 DFRKFDNMDFYFPEFAHLGEQEIKNEEVYLQQTPASNNGTFGYTPRYAEYKYSMNEVHGD 472
Query 181 LSSVFA 186
A
Sbjct 473 FRGNMA 478
>gi|547312923|ref|WP_022044635.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
gi|524208404|emb|CCZ76639.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
Length=338
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (45%), Gaps = 15/158 (9%)
Query 7 IPQLAIASRLQEYKDLLGAGGSRYSDWLETFFASKIE--HVDRPKLIFSASQTVN---VQ 61
+P+L + +++Q + D L G R D T + +K +V++P + ++N V+
Sbjct 54 VPELRLRTKIQNWMDRLFVSGGRVGDVFRTLWGTKSSAIYVNKPDFLGVWQASINPSNVR 113
Query 62 VIMNQSGLNNFSGTQP-LGQQGGAI-AFNDRLGRRQ-SYYFREPG--YMIDMLSIRPVYY 116
+ N S SG LGQ + + D G YY +EPG +I ML P Y
Sbjct 114 AMANGSA----SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLITMLVPEPAYS 169
Query 117 WATITPDYLSYRGADYFNPIYNDIGYQDISISRIANCP 154
+ PD S D FNP N IG+Q + R + P
Sbjct 170 -QGLHPDLASISFGDDFNPELNGIGFQLVPRHRFSMMP 206
>gi|599087433|gb|AHN52642.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=281
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (29%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query 6 TIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFA--SKIEHVDRPKLIFSASQTVNVQVI 63
TI L A ++Q++ + L GGSRY++ L +FF S + RP+ + S ++ VNV I
Sbjct 137 TINGLRTAFQMQKFYERLARGGSRYTEVLRSFFGVVSPDARLQRPEFLGSFTKMVNVNPI 196
Query 64 MNQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYY--FREPGYMIDMLSIRP-VYYWATI 120
S +N T P QG A+ + + F E GY+ + R + Y I
Sbjct 197 AQTSATDN---TSP---QGNLSAYGVTAAKFHGFTKSFVEHGYIFGFVCARADLTYQQGI 250
Query 121 TPDYLSYRGADYFNPIYNDIGYQDISISRI 150
+L D++ P + +G Q I + I
Sbjct 251 NKMWLRSTVYDFYWPTFAHLGEQAIELREI 280
>gi|575096056|emb|CDL66947.1| unnamed protein product [uncultured bacterium]
Length=570
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
Query 6 TIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFA--SKIEHVDRPKLIFSASQTVNVQVI 63
TI QL +A ++Q++ + GGSRY++ + +FF S + R + + +N+ +
Sbjct 318 TINQLRMAFQIQKFYEKQARGGSRYTEVIRSFFGVTSPDARLQRSEYLGGNRIPININQV 377
Query 64 MNQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYY--FREPGYMIDMLSIRPVY-YWATI 120
+ QSG + S T QG + + + F E G++I ++ R + Y I
Sbjct 378 IQQSGTGSASTT----PQGTVVGMSQTTDTHSDFTKSFTEHGFIIGVMCARYDHTYQQGI 433
Query 121 TPDYLSYRGADYFNPIYNDIGYQDISISRI-ANCPPQIDNVAVQEPCFNEFRASYDEVLG 179
+ DY+ P++++IG Q I I A D V + + E+R V G
Sbjct 434 DRMWSRKDKFDYYWPVFSNIGEQAIKNKEIYAQGNATDDEVFGYQEAWAEYRYKPSRVTG 493
Query 180 QLSSVFA 186
++ S +A
Sbjct 494 EMRSSYA 500
>gi|649557305|gb|KDS63784.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649559156|gb|KDS65543.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=245
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (42%), Gaps = 9/185 (5%)
Query 7 IPQLAIASRLQEYKDLLGAGGSRYSDWLETFFA--SKIEHVDRPKLIFSASQTVNVQVIM 64
I + ++ LQ + + GSRY + + + F S + RP+ + ++V ++
Sbjct 5 INDIRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVL 64
Query 65 NQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRP-VYYWATITPD 123
S ++ S + G + N R YF E GY++ ++SIRP Y + D
Sbjct 65 QTSSTDSTSPQANMAGHGISAGVNHGFTR----YFEEHGYIMGIMSIRPRTGYQQGVPKD 120
Query 124 YLSYRGADYFNPIYNDIGYQDISISRIANCPPQIDNVAV--QEPCFNEFRASYDEVLGQL 181
+ + D++ P + +G Q+I + N P + E++ S +EV G
Sbjct 121 FRKFDNMDFYFPEFAHLGEQEIKNEELYLNESDAANEGTFGYTPRYAEYKYSQNEVHGDF 180
Query 182 SSVFA 186
A
Sbjct 181 RGNMA 185
>gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str.
3999B T(B) 6]
Length=390
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (42%), Gaps = 9/185 (5%)
Query 7 IPQLAIASRLQEYKDLLGAGGSRYSDWLETFFA--SKIEHVDRPKLIFSASQTVNVQVIM 64
I + ++ LQ + + GSRY + + + F S + RP+ + ++V ++
Sbjct 150 INDIRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVL 209
Query 65 NQSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRP-VYYWATITPD 123
S ++ S + G + N R YF E GY++ ++SIRP Y + D
Sbjct 210 QTSSTDSTSPQANMAGHGISAGVNHGFTR----YFEEHGYIMGIMSIRPRTGYQQGVPKD 265
Query 124 YLSYRGADYFNPIYNDIGYQDISISRIANCPPQIDNVAV--QEPCFNEFRASYDEVLGQL 181
+ + D++ P + +G Q+I + N P + E++ S +EV G
Sbjct 266 FRKFDNMDFYFPEFAHLGEQEIKNEELYLNESDAANEGTFGYTPRYAEYKYSQNEVHGDF 325
Query 182 SSVFA 186
A
Sbjct 326 RGNMA 330
>gi|444297974|dbj|GAC77852.1| major capsid protein [uncultured marine virus]
Length=202
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (6%)
Query 1 MAGVQTIPQLAI-----ASRLQEYKDLLGAGGSRYSDWLETF-FASKIEHVDRPKLIFSA 54
+A + T Q+++ A LQ Y++ GSRYS++L S + RP+ +
Sbjct 18 VADLSTAEQISVNDFRRAFALQRYQEARSKYGSRYSEYLRFLGIKSSDARLQRPEFLGGG 77
Query 55 SQTVNVQVIMN-QSGLNNFSGTQPLGQQGGAIAFNDRLGRRQSYYFREPGYMIDMLSIRP 113
T+N ++N S ++ + LG GG + R + + +F E G++I ++S+RP
Sbjct 78 KTTINFSEVLNTTSSVDGATPVDDLGHMGGHGIASMRSNKYRR-FFEEHGHVITLMSVRP 136
Query 114 -VYYWATITPDYLSYRGADYFNPIYNDIGYQDI 145
Y + + DYF IG Q I
Sbjct 137 KTMYSNGLHRKFSRTTKEDYFQRELQYIGQQPI 169
Lambda K H a alpha
0.319 0.135 0.400 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1244344362366