bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_7

Length=639
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_0935                                              49.3    0.002


> 585502.HMPREF0645_0935
Length=519

 Score = 49.3 bits (116),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 53/231 (23%), Positives = 86/231 (37%), Gaps = 26/231 (11%)

Query  343  LDASTDTGFSVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLG  402
            +D   + G+  +V  LR    +   +     +G    D  R  +GV+       + ++LG
Sbjct  253  VDVDNNLGY-FSVSSLRSAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLG  311

Query  403  VWQASINPSNVRAMANGSASGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAM  462
             + + +  S+V   +  +A+      G L     +    SG   I + AKE G  M I  
Sbjct  312  GFDSDLQVSDVTQTSGTTATEYKPEAGYLGRIAGKGTG-SGRGRIVFDAKEHGVLMCIYS  370

Query  463  LVPEPAY-FQGLHPDLASISFGDDFNPELNGIGFQQVPRHRFTMMPRGMDDITAHQEKNP  521
            LVP+  Y    L P +  +   D F PE   +G Q +                       
Sbjct  371  LVPQIQYDCTRLDPMVDKLDRFDFFTPEFENLGMQPLNS---------------------  409

Query  522  WLGYAGTGVTIDPNMASVGEEVAWSWLRTDYPRLHGDFAQNGNYQYWVLAR  572
               Y  +  T DP    +G +  +S  +T     HG FAQN     W ++R
Sbjct  410  --SYISSFCTPDPKNPVLGYQPRYSEYKTALDINHGQFAQNDALSSWSVSR  458



Lambda      K        H        a         alpha
   0.321    0.140    0.442    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1449799565630