bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-24_CDS_annotation_glimmer3.pl_2_2

Length=647
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   375   2e-118


> 483216.BACEGG_02721
Length=578

 Score =   375 bits (963),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 240/656 (37%), Positives = 333/656 (51%), Gaps = 90/656 (14%)

Query  3    SNLFSFGDVRNHPHRSGFDLSRRICFTSKAGELLPVYYKLVYPGDKFQIRHQLFTRTQPV  62
            +N+ S   +RN P R+GFDLS +  FT+KAGELLPV  K V PGD F+I  + FTRTQPV
Sbjct  2    ANIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPV  61

Query  63   NTAAYTRIREYLDWYFVPLRLINKNLPQALMNMQDNPVQASGI--VSNKIVTSDIPWTLL  120
            NTAA+ RIREY D++FVP  L+       L  M DNP  A  I    N +++ ++P+   
Sbjct  62   NTAAFARIREYYDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYM--  119

Query  121  GHDSKPLGIANLLFRMYKGDSSAQIDPVLNFFGFNSGTLGAKLAMMLRYGNFISKDYSAS  180
                    IA+ +  +    +SA  D   N+FG+N      KL   L YGN+ S      
Sbjct  120  ----TSEAIASYINAL--STASALADYKSNYFGYNRSKSSVKLLEYLGYGNYES------  167

Query  181  TPGDLSFGLSKSDFDLRAYNSSYAVNILPFAVYQKIYADHFRFSQWEKNEPYTYNFDWYS  240
                        D++     ++   NI     YQKIY+D +R SQWE+  P T+N D+  
Sbjct  168  --------FLTDDWNTAPLMANLNHNIFGLLAYQKIYSDFYRDSQWERVSPSTFNVDYLD  219

Query  241  GGNVFNVFALGAADSTLKTYLEGNNLFTLRYANWPKDLFMGVMPNSQLGDVSVVDITTDS  300
            G ++     L  A ST   + +  N F LRY NW KDLF GV+P+ Q G+ +V  IT D 
Sbjct  220  GSSM----NLDNAYST--EFYQNYNFFDLRYCNWQKDLFHGVLPHQQYGETAVASITPD-  272

Query  301  ATRSYPVSLFSSASGPNGINKLGAAIPDAPFNEATDTPSTYNFSIDFGTEKWDSSIKAKT  360
             T    +S FS+                        +P+T                    
Sbjct  273  VTGKLTLSNFSTVG---------------------TSPTT--------------------  291

Query  361  WVGVNNVGSGVLGVTVPGSQLAASFSVLQLRMAEAVQKYREVSQVADQTVRDQIYAHFGV  420
                    SG     +P        S+L LR AE +QK++E++Q  ++  +DQ+  H+GV
Sbjct  292  -------ASGTATKNLPAFDTVGDLSILVLRQAEFLQKWKEITQSGNKDYKDQLEKHWGV  344

Query  421  SLSPALSDTCFRVGGSASNIDISEVVNNNLAGENQADIMGKGVGTGQGGTSFSSD-EYGV  479
            S+    S+ C  +GG +S+IDI+EV+N N+ G   ADI GKGVG   G  +F+S+  YG+
Sbjct  345  SVGDGFSELCTYLGGVSSSIDINEVINTNITGSAAADIAGKGVGVANGEINFNSNGRYGL  404

Query  480  LMAIYHVVPLLDYVITGQPHELLYTNTSDLPFPEFDSIGMQSLHFGRFFNYKSDKFTFDP  539
            +M IYH +PLLDY         L  N++D   PEFD +GMQS+   +  N    +   + 
Sbjct  405  IMCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSMPLVQLMN--PLRSFANA  462

Query  540  TASVMGYVPRFIDLKTDYDEVYGAFRSTLKSWVAPLDPEYLSKWIDSTVSAGQTYYS---  596
            +  V+GYVPR+ID KT  D+  G F+ TL SWV       + K +     A     S   
Sbjct  463  SGLVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVISYGNISVLKQVTLPNDAPPIEPSEPV  522

Query  597  -----LNYGFFKVNPSVLDSIFKVKADSSMDTDQFLSSLYLDVKAVRNFDYDGMPY  647
                 +N+ FFKVNP  LD IF V+A    +TDQFL S + D+KAVRN D DG+PY
Sbjct  523  PSVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQFLCSSFFDIKAVRNLDTDGLPY  578



Lambda      K        H        a         alpha
   0.319    0.136    0.407    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1473325724910