bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-27_CDS_annotation_glimmer3.pl_2_4

Length=347
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              85.9    1e-15


> 585502.HMPREF0645_1835
Length=553

 Score = 85.9 bits (211),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 16/263 (6%)

Query  95   ISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIIVNP  154
             S++  R   A  + L +    G ++++ +   + V +         YLGG   D+ V+ 
Sbjct  296  FSVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDMQVSD  355

Query  155  ITQTVET--TDSGSYVGSLGSQAGLATCFGNSDGSISVFCDEESIVMGIMYVMPMPVYDS  212
            +TQT  T  T+     G LG  AG  T  G+  G I     E  ++M I  ++P   YD 
Sbjct  356  VTQTSGTTATEYKPEAGYLGRVAGKGT--GSGRGRIVFDAKEHGVLMCIYSLVPQIQYDC  413

Query  213  I-LPKWLTYRERLDSFNPEFDHIGYQPIYLKELAAIQAFESGKDLNTVFGYQRPWYEYVQ  271
              L   +   +R D F PEF+++G QP+     + I +F +    N V GYQ  + EY  
Sbjct  414  TRLDPMVDKLDRFDYFTPEFENLGMQPL---NSSYISSFCTTDPKNPVLGYQPRYSEYKT  470

Query  272  KVDRAHGLFLSS--LRNFIM--FRSFENAPELGKSFTVMQPGSVNNVFSV----TEVSDK  323
             +D  HG F  S  L ++ +  FR +   P+L  +   + PG +N++F V    TE +D 
Sbjct  471  ALDVNHGQFAQSDALSSWSVSRFRRWTTFPQLEIADFKIDPGCLNSIFPVDYNGTEANDC  530

Query  324  ILGQIHFDCTAQLPISRVVVPRL  346
            + G  +F+      +S   +PR+
Sbjct  531  VYGGCNFNIVKVSDMSVDGMPRV  553



Lambda      K        H        a         alpha
   0.318    0.135    0.396    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 627214779630