bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-28_CDS_annotation_glimmer3.pl_2_2

Length=536
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  484018.BACPLE_00804                                                 82.8    5e-14


> 484018.BACPLE_00804
Length=613

 Score = 82.8 bits (203),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 171/432 (40%), Gaps = 54/432 (13%)

Query  136  IKISAYPFRAYEAVY---NAYIRNTRNNPFILN-----GKKTYNRFITNDAGGADSLTPK  187
            +K S +P  AY+ +Y   N Y +  R+NP   N     G     +      G  DS    
Sbjct  189  LKFSPFPLFAYQKIYADFNRYTQWERSNPSTFNIDYISGSADSLQLDFTVEGFKDSFNLF  248

Query  188  SLFYANWQSD---------AYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVVNTAI  238
             + Y+NWQ D          Y  A   P  G   +V   T    +  + G  V  +N  +
Sbjct  249  DMRYSNWQRDLLHGTIPQAQYGEASAVPVSGSMQVVEGPTPPAFTTGQDG--VAFLNGNV  306

Query  239  VDEDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQRY  298
              +  + +     S GE+ + + +    +G  +   S     + G+SI   R   A Q++
Sbjct  307  TIQGSSGYLQAQTSVGES-RILRFNNTNSGLIVEGDS-----SFGVSILALRRAEAAQKW  360

Query  299  LELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVG  358
             E+       Y   IE  +  +V     +M ++LG I  D+ +N +     T    A + 
Sbjct  361  KEVALASEEDYPSQIEAHWGQSVNKAYSDMCQWLGSINIDLSINEVVNNNITGENAADIA  420

Query  359  ALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKW-LTYRERLDSFN  417
              G+ +G  +   N  G       +  IV+ V HV+P   Y +  P +  T    LD   
Sbjct  421  GKGTMSGNGSINFNVGG-------QYGIVMCVFHVLPQLDYITSAPHFGTTLTNVLDFPI  473

Query  418  PEFDHIGYQPI-YVRELAAVQARQ--FNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLR  474
            PEFD IG + +  +R L  V+ +   F V P   FGY   +Y +    D++ G F  SL+
Sbjct  474  PEFDKIGMEQVPVIRGLNPVKPKDGDFKVSPNLYFGYAPQYYNWKTTLDKSMGEFRRSLK  533

Query  475  NFIM-----------YRSFVDVPELGKD-----FTTMKPGDVNNVFSVTEVGDKILGQIH  518
             +I+              F D P +  D     F  + P  ++N+F+V    D  L    
Sbjct  534  TWIIPFDDEALLAADSVDFPDNPNVEADSVKAGFFKVSPSVLDNLFAVKANSD--LNTDQ  591

Query  519  FDCTAQLPISRV  530
            F C+    ++ V
Sbjct  592  FLCSTLFDVNVV  603



Lambda      K        H        a         alpha
   0.319    0.136    0.404    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1164444220240