bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-32_CDS_annotation_glimmer3.pl_2_1

Length=411
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              50.1    7e-04


> 585502.HMPREF0645_1835
Length=553

 Score = 50.1 bits (118),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 54/228 (24%), Positives = 96/228 (42%), Gaps = 31/228 (14%)

Query  101  AVDISVSGQSVSMRNITFASRMQRYMDLAFAGGGRNSDFYESQFDVKL--SQDNTCPAFL  158
             VD   S    S+ ++  A  + + + +    G    D   + + V++  S+D       
Sbjct  286  GVDTDSSEGDFSVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLG  345

Query  159  GSDSFDMNVNTLYQTTG-----FEDNSSPLGAFSGQLSGGTRFRRRNYHFNDDGYFMEIT  213
            G DS DM V+ + QT+G     ++  +  LG  +G+ +G  R  R  +   + G  M I 
Sbjct  346  GFDS-DMQVSDVTQTSGTTATEYKPEAGYLGRVAGKGTGSGR-GRIVFDAKEHGVLMCIY  403

Query  214  SIVPRVYYP-SYINPTSRQISLGQQYAPALDNIAMQGLKASTVFGEVQNLGANTVTYANS  272
            S+VP++ Y  + ++P   ++     + P  +N+ MQ L +S +         N V     
Sbjct  404  SLVPQIQYDCTRLDPMVDKLDRFDYFTPEFENLGMQPLNSSYISSFCTTDPKNPV-----  458

Query  273  TLSIPGFKLQESNYVGYEPAWSELMTAVSKPHGRLCND--LDYWVLSR  318
                          +GY+P +SE  TA+   HG+      L  W +SR
Sbjct  459  --------------LGYQPRYSEYKTALDVNHGQFAQSDALSSWSVSR  492



Lambda      K        H        a         alpha
   0.318    0.133    0.390    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 807073176070