bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-36_CDS_annotation_glimmer3.pl_2_1

Length=264
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  679190.HMPREF0650_1079                                              44.3    0.018


> 679190.HMPREF0650_1079
Length=552

 Score = 44.3 bits (103),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 89/218 (41%), Gaps = 24/218 (11%)

Query  6    TIPQLAIASRLQEYKDLLGAGGSRYSDWLETFFASKIEHVDRPKLIFSASQTVNVQVIMN  65
            T+  +  A  L +   +    G  Y++ ++  F  ++      ++ +      N+QV   
Sbjct  294  TVQSIRNAFALDKLMRITQRAGKTYAEQIKAHFGFEVSEGRDGRVNYIGGFDSNIQV---  350

Query  66   QSGLNNFSGTQPLGQQGGAIAFNDRLGR-----------RQSYYFREPGYMIDMLSIRP-  113
               +   SGT    +QG +I     LGR              +   E G ++ + S+ P 
Sbjct  351  -GDVTQMSGTTASPEQGVSIKHGGYLGRVTGKAQGSGSGHIEFDAHEHGILMCIYSLVPD  409

Query  114  VYYWAT-ITPDYLSYRGADYFNPIYNDIGYQDISISRIANCPPQIDNVAVQEPCFNEFRA  172
            + Y AT I P        D+F P + D+G Q +    I++   Q +     +P ++E++ 
Sbjct  410  MQYDATRIDPFVTKLSRGDFFMPEFEDLGMQPLQTRYISDIRTQTEKFKGWQPRYSEYKT  469

Query  173  SYDEVLGQLSSVFAAETSRPLYSYWVQQRNESLSSLSS  210
            S D   GQ ++       +PL SYW   R  +  +L +
Sbjct  470  SLDINHGQFAN------GQPL-SYWTVGRGRAGETLET  500



Lambda      K        H        a         alpha
   0.319    0.134    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 390480509360