bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-37_CDS_annotation_glimmer3.pl_2_1

Length=251
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_0935                                              62.0    2e-08


> 585502.HMPREF0645_0935
Length=519

 Score = 62.0 bits (149),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 106/231 (46%), Gaps = 22/231 (10%)

Query  1    MDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVYTNDYIERSETPV-YEGGFSSEIIFQEVI  59
            + +L  A  V  +L+    +G T+QD ++  Y  +  +  +  V Y GGF S++   +V 
Sbjct  264  VSSLRSAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDLQVSDVT  323

Query  60   SNS---ATENEP----LGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGN  112
              S   ATE +P    LG +AG+G  TG   G +     E   ++ I S+ P+I Y    
Sbjct  324  QTSGTTATEYKPEAGYLGRIAGKG--TGSGRGRIVFDAKEHGVLMCIYSLVPQIQYD-CT  380

Query  113  RFDVDLDTLD--DLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYM  170
            R D  +D LD  D   P  + +G Q L ++ ++ +    T D +  +  +G QP + +Y 
Sbjct  381  RLDPMVDKLDRFDFFTPEFENLGMQPLNSSYISSF---CTPDPKNPV--LGYQPRYSEYK  435

Query  171  TNYNKVFGNFAIKD--SEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVF  219
            T  +   G FA  D  S   ++  R +       IAD    IDP   N VF
Sbjct  436  TALDINHGQFAQNDALSSWSVSRFRRWTTFPQLEIADFK--IDPGCLNSVF  484



Lambda      K        H        a         alpha
   0.316    0.134    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 355295399150