bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-39_CDS_annotation_glimmer3.pl_2_1

Length=225
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              47.4    0.001


> 888743.HMPREF9141_0985
Length=531

 Score = 47.4 bits (111),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 58/226 (26%), Positives = 96/226 (42%), Gaps = 40/226 (18%)

Query  15   NSQVVLNQAGQSGFEGG--ESAALGQMGGSISFNTVLGREQTYYFKEPGYIFDMMTIRPV  72
            N  V+     QS F+ G  ES  LG +GG     ++      +  KE G I  + ++ P 
Sbjct  300  NPVVISEVVNQSEFDRGADESPCLGDLGGK-GVGSLNSSSIDFDVKEHGIIMCIYSVVPQ  358

Query  73   YFWTG--IRPDYLEYRGPDYFNPIYNDIGYQ------------DVPL-------WRLGYG  111
              + G    P   + R  D+F P + D+GYQ            D P+        RL  G
Sbjct  359  TEYNGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTYLDNPVPDGPEKQKRLAAG  418

Query  112  WKADTVSSLS--VAKEPCYNEFRSSYDEVLGSLQATLTPKASTPLQSYWVQQR-DFYLIG  168
            +   ++ + +  +  +  YNE+++S D V G  ++ L+        SYW   R DF   G
Sbjct  419  YPLSSIEANNRLLGWQVRYNEYKTSRDLVFGEFESGLS-------LSYWCSPRYDFGFDG  471

Query  169  LSSNPNEV----SPSMLFTNLNTVNNPF--ASDMEDNFFVNMSYKV  208
             + +   V    SP+  + N + +N  F  ++   D+F VN  + V
Sbjct  472  KAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDV  517



Lambda      K        H        a         alpha
   0.318    0.135    0.406    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 283854140570