bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-40_CDS_annotation_glimmer3.pl_2_1

Length=204
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              74.3    1e-12


> 888743.HMPREF9141_0985
Length=531

 Score = 74.3 bits (181),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 62/241 (26%), Positives = 106/241 (44%), Gaps = 44/241 (18%)

Query  1    MQSEIAFDEIVSNS-----ATEEEPLGTLAGRGVATMYKSGRGLKIKCTEPSMIMALGSI  55
              + +   E+V+ S     A E   LG L G+GV ++  S     +K  E  +IM + S+
Sbjct  298  FDNPVVISEVVNQSEFDRGADESPCLGDLGGKGVGSLNSSSIDFDVK--EHGIIMCIYSV  355

Query  56   TPRIDYSQGNKW--WTRLQNMDDFHKPTLDAIGFQELIAEE-------------------  94
             P+ +Y  G  +  + R    +DF +P    +G+Q ++  +                   
Sbjct  356  VPQTEY-NGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTYLDNPVPDGPEKQKR  414

Query  95   -AAAWTTEATDDHELVYQSLGKQPSWIEYTTDVNETYGEFAAGMPLAFMCLNRVYEENSD  153
             AA +   + + +  +   LG Q  + EY T  +  +GEF +G+ L++ C  R Y+   D
Sbjct  415  LAAGYPLSSIEANNRL---LGWQVRYNEYKTSRDLVFGEFESGLSLSYWCSPR-YDFGFD  470

Query  154  HTIGN----------ASTYIDPTIYNSIFAESRLSSQNFWVQVAFDVTARRVMSAKQIPN  203
               G+          A  Y++P+I N+IF  S + + +F V   FDV A R MS   +  
Sbjct  471  GKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKAVRPMSVSGLAG  530

Query  204  L  204
            L
Sbjct  531  L  531



Lambda      K        H        a         alpha
   0.316    0.130    0.386    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 222524777800